RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 PRAMEF17Q5VTA0 474 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 FAM199XQ6PEV8 388 aaPredicted RBP14.6□□□□□ -0.07
RAB40B-203ENST00000570676 ADGRD1Q6QNK2 874 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 TAOK1Q7L7X3 1001 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 ZC3HC1Q86WB0 502 aaKnown RBP14.6□□□□□ -0.07
RAB40B-203ENST00000570676 TDRPQ86YL5 185 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 TMEM126BQ8IUX1 230 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 SLC38A9Q8NBW4 561 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 OR1L3Q8NH93 324 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 FLVCR1-AS1Q8TAF5 88 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 APOBEC4Q8WW27 367 aaKnown RBP14.6□□□□□ -0.07
RAB40B-203ENST00000570676 VPS39Q96JC1 886 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 LRFN5Q96NI6 719 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 TRAPPC9Q96Q05 1148 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 TRIM4Q9C037 500 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 ACTL8Q9H568 366 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 ACTR10Q9NZ32 417 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 CTNNAL1Q9UBT7 734 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 CDYLQ9Y232 598 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 ASF1AQ9Y294 204 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 KCNMB2Q9Y691 235 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 SPTA1P02549 2419 aa14.6□□□□□ -0.07
RAB40B-203ENST00000570676 PCSK5Q92824 1860 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 C2orf74A8MZ97 194 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 MAP2K7O14733 419 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 PRMT5O14744 637 aaPredicted RBP14.59□□□□□ -0.07
RAB40B-203ENST00000570676 CDH16O75309 829 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 SASH3O75995 380 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 FMO4P31512 558 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 RORAP35398 523 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 RPS18P62269 152 aaKnown RBP14.59□□□□□ -0.07
RAB40B-203ENST00000570676 ILF2Q12905 390 aaKnown RBP14.59□□□□□ -0.07
RAB40B-203ENST00000570676 RASA2Q15283 850 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 SYTL3Q4VX76 610 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 LGSNQ5TDP6 509 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 SPESP1Q6UW49 350 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 CROCCP2Q86T23 111 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 TBC1D21Q8IYX1 336 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 SLC22A15Q8IZD6 547 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 RIBC1Q8N443 379 aaPredicted RBP14.59□□□□□ -0.07
RAB40B-203ENST00000570676 GPATCH11Q8N954 259 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 OR5K2Q8NHB8 316 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 C9orf43Q8TAL5 461 aaPredicted RBP14.59□□□□□ -0.07
RAB40B-203ENST00000570676 MCMBPQ9BTE3 642 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 P2RY12Q9H244 342 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 CCDC68Q9H2F9 335 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 FANCEQ9HB96 536 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 TBK1Q9UHD2 729 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 POLHQ9Y253 713 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 PCDHB3Q9Y5E6 796 aa14.59□□□□□ -0.07
RAB40B-203ENST00000570676 IQANK1A0A1B0GTG1 560 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 CDC14CA4D256 554 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 TMEM150CB9EJG8 249 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 KRT38O76015 456 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 RECKO95980 971 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 ESR1P03372 595 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 PKMP14618 531 aaKnown RBP14.58□□□□□ -0.08
RAB40B-203ENST00000570676 UGT2B7P16662 529 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 RPS3P23396 243 aaKnown RBP eCLIP14.58□□□□□ -0.08
RAB40B-203ENST00000570676 CNTFP26441 200 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 PEBP1P30086 187 aaKnown RBP14.58□□□□□ -0.08
RAB40B-203ENST00000570676 CCR7P32248 378 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 SHMT2P34897 504 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 ADARP55265 1226 aaKnown RBP14.58□□□□□ -0.08
RAB40B-203ENST00000570676 IL10RAQ13651 578 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 BMPR2Q13873 1038 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 TMED2Q15363 201 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 RBM20Q5T481 1227 aaKnown RBP14.58□□□□□ -0.08
RAB40B-203ENST00000570676 MROH9Q5TGP6 573 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 PTRHD1Q6GMV3 140 aaKnown RBP14.58□□□□□ -0.08
RAB40B-203ENST00000570676 LCN10Q6JVE6 187 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 ZNF549Q6P9A3 640 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 ATG14Q6ZNE5 492 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 CDHR3Q6ZTQ4 885 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 TRIM73Q86UV7 250 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 VRK3Q8IV63 474 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 DSELQ8IZU8 1212 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 ABHD17AQ96GS6 310 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 BIRC8Q96P09 236 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 NDNQ99608 321 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 KLHL25Q9H0H3 589 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 ACBD3Q9H3P7 528 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 SYTL2Q9HCH5 934 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 SPHK1Q9NYA1 384 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 GNPTGQ9UJJ9 305 aa14.58□□□□□ -0.08
RAB40B-203ENST00000570676 CORO1CQ9ULV4 474 aaPredicted RBP14.58□□□□□ -0.08
RAB40B-203ENST00000570676 MTO1Q9Y2Z2 717 aaKnown RBP14.58□□□□□ -0.08
RAB40B-203ENST00000570676 TNRC6AQ8NDV7 1962 aaKnown RBP14.57□□□□□ -0.08
RAB40B-203ENST00000570676 FAM95CA0A1B0GW59 222 aa14.57□□□□□ -0.08
RAB40B-203ENST00000570676 PIPSLA2A3N6 862 aa14.57□□□□□ -0.08
RAB40B-203ENST00000570676 GOLGA6L10A6NI86 522 aa14.57□□□□□ -0.08
RAB40B-203ENST00000570676 IQCF5A8MTL0 148 aa14.57□□□□□ -0.08
RAB40B-203ENST00000570676 GPC4O75487 556 aa14.57□□□□□ -0.08
RAB40B-203ENST00000570676 WISP1O95388 367 aa14.57□□□□□ -0.08
RAB40B-203ENST00000570676 CHRM5P08912 532 aaPredicted RBP14.57□□□□□ -0.08
RAB40B-203ENST00000570676 SNRPAP09012 282 aaKnown RBP14.57□□□□□ -0.08
RAB40B-203ENST00000570676 MYZAPP0CAP1 466 aa14.57□□□□□ -0.08
RAB40B-203ENST00000570676 PTPN4P29074 926 aa14.57□□□□□ -0.08
RAB40B-203ENST00000570676 PKLRP30613 574 aa14.57□□□□□ -0.08
RAB40B-203ENST00000570676 GABRA4P48169 554 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms