RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 CYLC1P35663 651 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 RFC3P40938 356 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 NR0B1P51843 470 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 TPI1P60174 286 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 TAZQ16635 292 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 BTBD16Q32M84 506 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 C2CD6Q53TS8 623 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 TCTE1Q5JU00 501 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 ZNF468Q5VIY5 522 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 ALS2CLQ60I27 953 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 SARM1Q6SZW1 724 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 ARHGEF18Q6ZSZ5 1173 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 SULF2Q8IWU5 870 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 RFLNBQ8N5W9 214 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 METTL27Q8N6F8 245 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 RASGEF1AQ8N9B8 481 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 OR52E1Q8NGJ3 308 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 FLVCR1-AS1Q8TAF5 88 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 CCDC47Q96A33 483 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 FAM81BQ96LP2 452 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 RMDN2Q96LZ7 410 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 TTC25Q96NG3 672 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 SMC6Q96SB8 1091 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 NRTNQ99748 197 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 ZFYVE21Q9BQ24 234 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 CNPY3Q9BT09 278 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 TDRD1Q9BXT4 1180 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 SCAND2PQ9GZW5 306 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 DEFB127Q9H1M4 99 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 CXorf56Q9H5V9 222 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 KCNK13Q9HB14 408 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 C14orf105Q9NVL8 296 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 FZD10Q9ULW2 581 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 SMC3Q9UQE7 1217 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 VPS9D1Q9Y2B5 631 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 TENM3Q9P273 2699 aa6.21□□□□□ -1.42
HERPUD1-217ENST00000569429 A0A1B0GVC2 190 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 ANKRD66B4E2M5 251 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 TCF21O43680 179 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 PEX1O43933 1283 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 IGHG3P01860 377 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 CREB1P16220 341 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 MCM3P25205 808 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 USP8P40818 1118 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 CYB561P49447 251 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 EFNA3P52797 238 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 TRIM14Q14142 442 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 SQLEQ14534 574 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 IHHQ14623 411 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 TMEM220Q6QAJ8 160 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 SEM1Q6ZVN7 128 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 PLEKHM3Q6ZWE6 761 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 MAATS1Q7Z4T9 603 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 TMC3Q7Z5M5 1100 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 DTWD1Q8N5C7 304 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 SLC5A8Q8N695 610 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 NPWQ8N729 165 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 TTC29Q8NA56 475 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 NAXEQ8NCW5 288 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 MSANTD4Q8NCY6 345 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 OR2L2Q8NH16 312 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 SLC22A8Q8TCC7 542 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 TMEM171Q8WVE6 324 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 FERD3LQ96RJ6 166 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 C11orf70Q9BRQ4 267 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 CCM2Q9BSQ5 444 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 ZCCHC2Q9C0B9 1178 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 TGIF2Q9GZN2 237 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 RBSNQ9H1K0 784 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 ZDHHC11Q9H8X9 412 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 PSD3Q9NYI0 1048 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 NCKAP5O14513 1909 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 PLCE1Q9P212 2302 aa6.2□□□□□ -1.42
HERPUD1-217ENST00000569429 DEFB108AA8MXU0 73 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 AQP7O14520 342 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 GAPDHSO14556 408 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 SIAH2O43255 324 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 MAFKO60675 156 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 SEC24DO94855 1032 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 MED26O95402 600 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 TPH1P17752 444 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 ERCC2P18074 760 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 CA4P22748 312 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 AMPD1P23109 780 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 CES1P23141 567 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 CEACAM8P31997 349 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 IDUAP35475 653 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 CCNFP41002 786 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 MMP13P45452 471 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 QPCTQ16769 361 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 ATP13A5Q4VNC0 1218 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 ZC3H12BQ5HYM0 836 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 MARC1Q5VT66 337 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 ALG1LQ6GMV1 187 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 FIGLAQ6QHK4 219 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 DNM1P46Q6ZS02 220 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 TEX26Q8N6G2 289 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 LPCAT1Q8NF37 534 aa6.19□□□□□ -1.42
HERPUD1-217ENST00000569429 JOSD2Q8TAC2 188 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms