RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SAGP10523 405 aaPredicted RBP6.96□□□□□ -1.29
CNOT1-216ENST00000569240 CREB1P16220 341 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 NAT1P18440 290 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 SOX9P48436 509 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 DLX5P56178 289 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 POU4F2Q12837 409 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 SMAD1Q15797 465 aaKnown RBP6.96□□□□□ -1.29
CNOT1-216ENST00000569240 AVPI1Q5T686 147 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 PRAMEF13Q5VWM6 474 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 SLC36A4Q6YBV0 504 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 FTHL17Q9BXU8 183 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 RNF32Q9H0A6 362 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 TMEM27Q9HBJ8 222 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 UXTQ9UBK9 157 aaPredicted RBP6.96□□□□□ -1.29
CNOT1-216ENST00000569240 GTF2A1LQ9UNN4 478 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 MSI1O43347 362 aaKnown RBP6.96□□□□□ -1.3
CNOT1-216ENST00000569240 SSX4O60224 188 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 LGR5O75473 907 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 PSMD10O75832 226 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 IL1AP01583 271 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 ETFAP13804 333 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 VEGFCP49767 419 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 FUT2Q10981 343 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 GALNT5Q7Z7M9 940 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 HS6ST3Q8IZP7 471 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 POMGNT2Q8NAT1 580 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 FCAMRQ8WWV6 532 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 FCRL3Q96P31 734 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-216ENST00000569240 DPCDQ9BVM2 203 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-216ENST00000569240 SLC25A51Q9H1U9 297 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 MROH8Q9H579 483 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 KLK4Q9Y5K2 254 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 TCAF2A6NFQ2 919 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 E5RJQ4 531 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 NKRFO15226 690 aaKnown RBP eCLIP6.96□□□□□ -1.3
CNOT1-216ENST00000569240 LRCH4O75427 683 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 KELP23276 732 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 XKP51811 444 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 PDIA6Q15084 440 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 METTL2BQ6P1Q9 378 aaKnown RBP6.96□□□□□ -1.3
CNOT1-216ENST00000569240 CORO6Q6QEF8 472 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 RTL4Q6ZR62 310 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 MGLLQ99685 303 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 IFT46Q9NQC8 304 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 SMOXQ9NWM0 555 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 ABCD2Q9UBJ2 740 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 FAM50BQ9Y247 325 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 DAPL1A0PJW8 107 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 IMPA2O14732 288 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 OIP5O43482 229 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 TMEM127O75204 238 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 EEDO75530 441 aaKnown RBP6.96□□□□□ -1.3
CNOT1-216ENST00000569240 RCBTB2O95199 551 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 ACADMP11310 421 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 UNGP13051 313 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-216ENST00000569240 RPL35P42766 123 aaKnown RBP6.96□□□□□ -1.3
CNOT1-216ENST00000569240 RPL6Q02878 288 aaKnown RBP6.96□□□□□ -1.3
CNOT1-216ENST00000569240 DSC3Q14574 896 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 NTRK2Q16620 822 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 PTCHD3Q3KNS1 767 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 UGT3A2Q3SY77 523 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 NOMO2Q5JPE7 1267 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 ZNF730Q6ZMV8 503 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 OR2T11Q8NH01 316 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 PORCNQ9H237 461 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 FAM118AQ9NWS6 357 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 PRSS51A0A1B0GVH4 220 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 FLRT2O43155 660 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 HOXA2O43364 376 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 MAOBP27338 520 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 FMO4P31512 558 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 DGKGP49619 791 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 ACTBP60709 375 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 ACTG1P63261 375 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 TEKQ02763 1124 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 CD47Q08722 323 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 PMS2P3Q13401 168 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 TOR1AIP1Q5JTV8 583 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 UBXN11Q5T124 520 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 LRIF1Q5T3J3 769 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 ATXN7L2Q5T6C5 722 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-216ENST00000569240 PGM2L1Q6PCE3 622 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 SULF1Q8IWU6 871 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 TRIM48Q8IWZ4 208 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 OR13F1Q8NGS4 319 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 OR10A6Q8NH74 314 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 OR5B12Q96R08 314 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 OR4K3Q96R72 315 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 REEP4Q9H6H4 257 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 PIN4Q9Y237 131 aaKnown RBP6.96□□□□□ -1.3
CNOT1-216ENST00000569240 CNTNAP2Q9UHC6 1331 aa6.96□□□□□ -1.3
CNOT1-216ENST00000569240 CD163L1Q9NR16 1453 aa6.95□□□□□ -1.3
CNOT1-216ENST00000569240 H3BUI4 141 aa6.95□□□□□ -1.3
CNOT1-216ENST00000569240 C8GP07360 202 aa6.95□□□□□ -1.3
CNOT1-216ENST00000569240 FMO3P31513 532 aa6.95□□□□□ -1.3
CNOT1-216ENST00000569240 PITPNBP48739 271 aa6.95□□□□□ -1.3
CNOT1-216ENST00000569240 TBX4P57082 545 aa6.95□□□□□ -1.3
CNOT1-216ENST00000569240 NKX6-1P78426 367 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-216ENST00000569240 APOFQ13790 326 aa6.95□□□□□ -1.3
CNOT1-216ENST00000569240 DENND1CQ8IV53 801 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms