RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	KLRB1	Q12918	225 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	PTK6	Q13882	451 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	SSPN	Q14714	243 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	NAA25	Q14CX7	972 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	NCF4	Q15080	339 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	DEFB110	Q30KQ9	67 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	FAM214A	Q32MH5	1076 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	TTLL9	Q3SXZ7	439 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	HSP90AA5P	Q58FG0	334 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	TCTE1	Q5JU00	501 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	C1orf189	Q5VU69	101 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	FAM69B	Q5VUD6	431 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	YOD1	Q5VVQ6	348 aa	Predicted RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	PAPD7	Q5XG87	772 aa	Known RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	ZNF385C	Q66K41	422 aa	Predicted RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	ZNF549	Q6P9A3	640 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	FAM198B	Q6UWH4	519 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	SYDE1	Q6ZW31	735 aa	Predicted RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	NEK10	Q6ZWH5	1172 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	MED25	Q71SY5	747 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	TAX1BP1	Q86VP1	789 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	CREG2	Q8IUH2	290 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	DENND6A	Q8IWF6	608 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	AGGF1	Q8N302	714 aa	eCLIP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	OR2A1	Q8NGT9	310 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	PROKR1	Q8TCW9	393 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	ADAMTS17	Q8TE56	1095 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	ASB11	Q8WXH4	323 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	SMPDL3A	Q92484	453 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	INPP5D	Q92835	1189 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	IP6K3	Q96PC2	410 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	GBP5	Q96PP8	586 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	MIPEP	Q99797	713 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	EBNA1BP2	Q99848	306 aa	Known RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	FAM167B	Q9BTA0	163 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	NAT9	Q9BTE0	207 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	TRIM55	Q9BYV6	548 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	TRIM4	Q9C037	500 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	DDX47	Q9H0S4	455 aa	Known RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	ING2	Q9H160	280 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	CLMP	Q9H6B4	373 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	FBXO6	Q9NRD1	293 aa	Predicted RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	SPATA7	Q9P0W8	599 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	IFT80	Q9P2H3	777 aa	Predicted RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	DHCR7	Q9UBM7	475 aa	Known RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	TSR3	Q9UJK0	312 aa	Known RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	RUVBL2	Q9Y230	463 aa	Known RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	PADI2	Q9Y2J8	665 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	DHRS7	Q9Y394	339 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	KLK4	Q9Y5K2	254 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	TENM4	Q6N022	2769 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635		A0A1W2PPV9	198 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	KRT87P	A6NCN2	255 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	ZNF839	A8K0R7	811 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	ARHGEF33	A8MVX0	844 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	GFY	I3L273	518 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	MYO1C	O00159	1063 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	ZBTB14	O43829	449 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	CTSV	O60911	334 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	VPS26A	O75436	327 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	KLF7	O75840	302 aa	Predicted RBP	6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	DNAJB5	O75953	348 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	TTC4	O95801	387 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	ONECUT2	O95948	504 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	CAT	P04040	527 aa	Known RBP	6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	MPC1L	P0DKB6	136 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	ERVK-10	P10266	1014 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	ENO3	P13929	434 aa	Predicted RBP	6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	PGAM1	P18669	254 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	NR1D1	P20393	614 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	IVD	P26440	423 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	PSMB5	P28074	263 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	CMPK1	P30085	196 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	OTX2	P32243	289 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	RPA3	P35244	121 aa	Predicted RBP	6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	FOLR3	P41439	243 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	SKIV2L2	P42285	1042 aa	Known RBP	6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	PAFAH1B1	P43034	410 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	PGD	P52209	483 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	PNLIPRP1	P54315	467 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	RRAD	P55042	308 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	VSX2	P58304	361 aa	Predicted RBP	6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	TLE1	Q04724	770 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	CHAF1B	Q13112	559 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	FASTK	Q14296	549 aa	Known RBP	6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	GRM7	Q14831	915 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	ARHGAP19	Q14CB8	494 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	MSS51	Q4VC12	460 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	SPANXN3	Q5MJ09	141 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	WASHC2D	Q5SRD0	308 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	UGT3A1	Q6NUS8	523 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	FBXO42	Q6P3S6	717 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	CYHR1	Q6ZMK1	362 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	TTLL10	Q6ZVT0	673 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	OVCH1	Q7RTY7	1134 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	KCNMB4	Q86W47	210 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	RAB43	Q86YS6	212 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	KLHL7	Q8IXQ5	586 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	TMEM102	Q8N9M5	508 aa	Predicted RBP	6.63	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms