RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.95□□□□□ -0.5
RNF40-211ENST00000567365 KIAA1614Q5VZ46 1190 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 FCRL6Q6DN72 434 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 MBOAT1Q6ZNC8 495 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 CDHR3Q6ZTQ4 885 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 TIPARPQ7Z3E1 657 aaKnown RBP11.95□□□□□ -0.5
RNF40-211ENST00000567365 CMC1Q7Z7K0 106 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 TAX1BP1Q86VP1 789 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 BPHLQ86WA6 291 aaPredicted RBP11.95□□□□□ -0.5
RNF40-211ENST00000567365 DNAJC22Q8N4W6 341 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 ZNF248Q8NDW4 579 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 MCOLN3Q8TDD5 553 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 DCAKDQ8WVC6 231 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 TCTN2Q96GX1 697 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 ZNF285Q96NJ3 590 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 PAFAH2Q99487 392 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 CTRCQ99895 268 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 SGPP1Q9BX95 441 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 FGF21Q9NSA1 209 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 ZNF180Q9UJW8 692 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 PILRAQ9UKJ1 303 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 FAM208BQ5VWN6 2430 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 FER1L5A0AVI2 2057 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 A0A087WUV0 522 aaPredicted RBP11.94□□□□□ -0.5
RNF40-211ENST00000567365 OR2A25A4D2G3 310 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 TARM1B6A8C7 271 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 CD1DP15813 335 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 MAP4P27816 1152 aaKnown RBP11.94□□□□□ -0.5
RNF40-211ENST00000567365 SLC26A3P40879 764 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 GRIA3P42263 894 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 GCGRP47871 477 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 CDKL1Q00532 357 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 PRDX1Q06830 199 aaKnown RBP11.94□□□□□ -0.5
RNF40-211ENST00000567365 TUBB3Q13509 450 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 BMPR2Q13873 1038 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 SLC29A2Q14542 456 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 TSNQ15631 228 aaKnown RBP11.94□□□□□ -0.5
RNF40-211ENST00000567365 SF1Q15637 639 aaKnown RBP11.94□□□□□ -0.5
RNF40-211ENST00000567365 GPR19Q15760 415 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 UAP1Q16222 522 aaPredicted RBP11.94□□□□□ -0.5
RNF40-211ENST00000567365 SOWAHCQ53LP3 525 aaPredicted RBP11.94□□□□□ -0.5
RNF40-211ENST00000567365 TMEM164Q5U3C3 297 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 ZNF425Q6IV72 752 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 WDR93Q6P2C0 686 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 FIGLAQ6QHK4 219 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 AGTRAPQ6RW13 159 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 SUSD1Q6UWL2 747 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 ZFAND4Q86XD8 727 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 CENPLQ8N0S6 344 aaPredicted RBP11.94□□□□□ -0.5
RNF40-211ENST00000567365 RAB42Q8N4Z0 105 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 PPFIBP2Q8ND30 876 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 OR8K5Q8NH50 307 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 OR56A3Q8NH54 315 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 PTERQ96BW5 349 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 FBXL8Q96CD0 374 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 DPH1Q9BZG8 443 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 KLHL25Q9H0H3 589 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 PDE7BQ9NP56 450 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 SLC6A20Q9NP91 592 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 IGSF5Q9NSI5 407 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 FETUBQ9UGM5 382 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 KLHL20Q9Y2M5 609 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 PCDHB11Q9Y5F2 797 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 ATMQ13315 3056 aa11.94□□□□□ -0.5
RNF40-211ENST00000567365 ZFYVE26Q68DK2 2539 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 NPEPPSL1A6NEC2 478 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 ZNF839A8K0R7 811 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 NRP2O60462 931 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 CTSVO60911 334 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 C2P06681 752 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 CTSBP07858 339 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 CCDC166P0CW27 439 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 LIPCP11150 499 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 CRABP2P29373 138 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 KCNC1P48547 511 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 SLC12A2P55011 1212 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 RELAQ04206 551 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 FOXM1Q08050 763 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 MAP7Q14244 749 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 TGIF1Q15583 401 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 OR4D1Q15615 310 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 MROH9Q5TGP6 573 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 ICE2Q659A1 982 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 PWWP2BQ6NUJ5 590 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 ADGRD1Q6QNK2 874 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 CCDC91Q7Z6B0 441 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 ADAMTSL2Q86TH1 951 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 ISCA2Q86U28 154 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 SPACA3Q8IXA5 215 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 KLHDC8AQ8IYD2 350 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 OR1L3Q8NH93 324 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 UHMK1Q8TAS1 419 aaKnown RBP11.93□□□□□ -0.5
RNF40-211ENST00000567365 AENQ8WTP8 325 aaKnown RBP11.93□□□□□ -0.5
RNF40-211ENST00000567365 NKD1Q969G9 470 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 ZUFSPQ96AP4 578 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 MRRFQ96E11 262 aaKnown RBP11.93□□□□□ -0.5
RNF40-211ENST00000567365 GPR78Q96P69 363 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 SYNPO2LQ9H987 977 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 SNX15Q9NRS6 342 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 SOHLH2Q9NX45 425 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms