RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ATP1A4Q13733 1029 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 THOC5Q13769 683 aaKnown RBP14.05□□□□□ -0.16
FANCA-220ENST00000566409 PTK6Q13882 451 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 PPP1R7Q15435 360 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 IGFBP7Q16270 282 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 LONRF1Q17RB8 773 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 NKAIN1Q4KMZ8 207 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 HSP90AA5PQ58FG0 334 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 PAPD7Q5XG87 772 aaKnown RBP14.05□□□□□ -0.16
FANCA-220ENST00000566409 FRMPD2BQ6IN97 320 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 CREG2Q8IUH2 290 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 IGDCC3Q8IVU1 814 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 DTWD1Q8N5C7 304 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 OR9A1PQ8NGU1 263 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 SLCO2A1Q92959 643 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 PDLIM2Q96JY6 352 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 FOPNLQ96NB1 174 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 DHRS4Q9BTZ2 278 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 SYNPO2LQ9H987 977 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 PLAC1Q9HBJ0 212 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 FBXO5Q9UKT4 447 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 SRPK3Q9UPE1 567 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 VPS9D1Q9Y2B5 631 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 NUP210LQ5VU65 1888 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 DOPEY2Q9Y3R5 2298 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 CNTRLQ7Z7A1 2325 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 LOC105369274A0A096LPK9 316 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 IGKV1-8A0A0C4DH67 115 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 LOC102723532A0A0G2JNH3 316 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 E5RI56 91 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 MYO1CO00159 1063 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 DNALI1O14645 258 aaPredicted RBP14.04□□□□□ -0.16
FANCA-220ENST00000566409 FANCGO15287 622 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 FKBP9O95302 570 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 MED26O95402 600 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 ONECUT2O95948 504 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 UMODP07911 640 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 ALAS2P22557 587 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 GABRB3P28472 473 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 DHX9Q08211 1270 aaKnown RBP14.04□□□□□ -0.16
FANCA-220ENST00000566409 SUSD1Q6UWL2 747 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 TTLL10Q6ZVT0 673 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 OR4N4Q8N0Y3 316 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 MAGEC3Q8TD91 643 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.04□□□□□ -0.16
FANCA-220ENST00000566409 KCNJ9Q92806 393 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 PKP4Q99569 1192 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 GPR21Q99679 349 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 NDC1Q9BTX1 674 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 ACAT2Q9BWD1 397 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 SLC6A20Q9NP91 592 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 ACSS2Q9NR19 701 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 IARS2Q9NSE4 1012 aaKnown RBP14.04□□□□□ -0.16
FANCA-220ENST00000566409 TXLNGQ9NUQ3 528 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 INTS7Q9NVH2 962 aaKnown RBP14.04□□□□□ -0.16
FANCA-220ENST00000566409 IRAK4Q9NWZ3 460 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 SPATA7Q9P0W8 599 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 IFT80Q9P2H3 777 aaPredicted RBP14.04□□□□□ -0.16
FANCA-220ENST00000566409 KLHL42Q9P2K6 505 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 DHRS7Q9Y394 339 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 PTRH2Q9Y3E5 179 aaKnown RBP14.04□□□□□ -0.16
FANCA-220ENST00000566409 PCDHGA9Q9Y5G4 932 aaKnown RBP14.04□□□□□ -0.16
FANCA-220ENST00000566409 MRFAP1Q9Y605 127 aa14.04□□□□□ -0.16
FANCA-220ENST00000566409 OR2A25A4D2G3 310 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 FITM1A5D6W6 292 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 GFYI3L273 518 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 MASP2O00187 686 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 ERVK-10P10266 1014 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 TCP1P17987 556 aaKnown RBP14.03□□□□□ -0.16
FANCA-220ENST00000566409 PGAM1P18669 254 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 OTX2P32243 289 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 SSPNQ14714 243 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 CRYMQ14894 314 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 ZC3H12BQ5HYM0 836 aaKnown RBP14.03□□□□□ -0.16
FANCA-220ENST00000566409 FBXO42Q6P3S6 717 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 NEK10Q6ZWH5 1172 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 COX15Q7KZN9 410 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 MRGPREQ86SM8 312 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 KCNMB4Q86W47 210 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 LMNTD2Q8IXW0 634 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 LRRC56Q8IYG6 542 aaPredicted RBP14.03□□□□□ -0.16
FANCA-220ENST00000566409 TEX19Q8NA77 164 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.03□□□□□ -0.16
FANCA-220ENST00000566409 FDCSPQ8NFU4 85 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 OR2Y1Q8NGV0 311 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 CD200R1Q8TD46 325 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 ZNF480Q8WV37 535 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 ASB11Q8WXH4 323 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 INPP5DQ92835 1189 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 CAPZA3Q96KX2 299 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 PWWP2AQ96N64 755 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 EBNA1BP2Q99848 306 aaKnown RBP14.03□□□□□ -0.16
FANCA-220ENST00000566409 SELENOSQ9BQE4 189 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 WDR83Q9BRX9 315 aaKnown RBP14.03□□□□□ -0.16
FANCA-220ENST00000566409 AARSD1Q9BTE6 412 aaKnown RBP14.03□□□□□ -0.16
FANCA-220ENST00000566409 SLC25A23Q9BV35 468 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 NUDT9Q9BW91 350 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 CUTCQ9NTM9 273 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 ASIC3Q9UHC3 531 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 PYCARDQ9ULZ3 195 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms