RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 ZNF37AP17032 561 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 OAS2P29728 719 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 SPRP35270 261 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 STAT5AP42229 794 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 POU4F1Q01851 419 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 ZNF460Q14592 562 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 SLMAPQ14BN4 828 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 SF1Q15637 639 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 CYP2A13Q16696 494 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 FAM153CQ494X1 144 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 CDHR3Q6ZTQ4 885 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 TAX1BP1Q86VP1 789 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 N4BP2L2Q92802 583 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 RNF31Q96EP0 1072 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 PDLIM5Q96HC4 596 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 UBL7Q96S82 380 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 CYTH2Q99418 400 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 ACSS3Q9H6R3 686 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 GPN2Q9H9Y4 310 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 POPDC3Q9HBV1 291 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 FAM60AQ9NP50 221 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 LHX9Q9NQ69 397 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 INTS7Q9NVH2 962 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 ADAMTS6Q9UKP5 1117 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 PCDHB3Q9Y5E6 796 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 PCDHGA4Q9Y5G9 962 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 A0A1W2PPV9 198 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 SLC16A5O15375 505 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 CPNE3O75131 537 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 WISP3O95389 354 aaPredicted RBP13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 C8GP07360 202 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 WT1P19544 449 aaPredicted RBP13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 MAGP20916 626 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 DEKP35659 375 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 HSD17B2P37059 387 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 SLC12A2P55011 1212 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 ITGA1P56199 1179 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 SP140Q13342 867 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 FASTKQ14296 549 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 USP10Q14694 798 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 ARHGAP19Q14CB8 494 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 ZIC1Q15915 447 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 FAM20CQ8IXL6 584 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 GSPT2Q8IYD1 628 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 DNAJC22Q8N4W6 341 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 NKAPQ8N5F7 415 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 EIF1ADQ8N9N8 165 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 OR1L3Q8NH93 324 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 ANKRD49Q8WVL7 239 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 ZUFSPQ96AP4 578 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 SLC45A3Q96JT2 553 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 SLC12A9Q9BXP2 914 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 CAB39LQ9H9S4 337 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 IKZF3Q9UKT9 509 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 PDE10AQ9Y233 779 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 CACNA1GO43497 2377 aa13.31□□□□□ -0.28
HERPUD1-210ENST00000565966 ZNF839A8K0R7 811 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 ZNF891A8MT65 544 aaPredicted RBP13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 TARM1B6A8C7 271 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 E7EQ34 232 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 ERVH48-1M5A8F1 160 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 SLU7O95391 586 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 SLC16A8O95907 504 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 SYF2O95926 243 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 KLK3P07288 261 aaPredicted RBP13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 MYBL2P10244 700 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 CYP2A7P20853 494 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 DLSTP36957 453 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 GABRA4P48169 554 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 ZKSCAN8Q15776 578 aaPredicted RBP13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 PHKG1Q16816 387 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 KIAA1614Q5VZ46 1190 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 FIGLAQ6QHK4 219 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 TRMT10CQ7L0Y3 403 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 GPR135Q8IZ08 494 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 UHMK1Q8TAS1 419 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 MCOLN3Q8TDD5 553 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 ZNF480Q8WV37 535 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 SMPDL3AQ92484 453 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 MRRFQ96E11 262 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 TSPAN17Q96FV3 270 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 LRFN5Q96NI6 719 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 TXLNGYQ9BZA5 131 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 ANKZF1Q9H8Y5 726 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 PARVBQ9HBI1 364 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 GPAMQ9HCL2 828 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 KCND3Q9UK17 655 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 CROTQ9UKG9 612 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 PLCL2Q9UPR0 1127 aa13.3□□□□□ -0.28
HERPUD1-210ENST00000565966 PHGDHO43175 533 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 HCRTR1O43613 425 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 HBQ1P09105 142 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 STMN1P16949 149 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 TCN2P20062 427 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 PSMB5P28074 263 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 TNFRSF8P28908 595 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 IMPA1P29218 277 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 PMS2P54278 862 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 PNLIPRP1P54315 467 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 MC1RQ01726 317 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms