RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 LGR4Q9BXB1 951 aa12.31□□□□□ -0.44
NSMCE1-208ENST00000565070 SLC52A3Q9NQ40 469 aa12.31□□□□□ -0.44
NSMCE1-208ENST00000565070 GPR27Q9NS67 375 aa12.31□□□□□ -0.44
NSMCE1-208ENST00000565070 ARL15Q9NXU5 204 aa12.31□□□□□ -0.44
NSMCE1-208ENST00000565070 ATXN10Q9UBB4 475 aa12.31□□□□□ -0.44
NSMCE1-208ENST00000565070 A0A1W2PR77 199 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 VILLO15195 856 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 SLCO2B1O94956 709 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 EBLN1P0CF75 366 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 EPB42P16452 691 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 XRCC1P18887 633 aaPredicted RBP12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 ITPKAP23677 461 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 MAOBP27338 520 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 PRLHRP49683 370 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 HNMTP50135 292 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 C21orf59P57076 290 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 BOP1Q14137 746 aaKnown RBP12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 BCL7AQ4VC05 210 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 PDCD4Q53EL6 469 aaKnown RBP12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 CMPK2Q5EBM0 449 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 DOK6Q6PKX4 331 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 MBOAT1Q6ZNC8 495 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 SYT12Q8IV01 421 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 PCYOX1LQ8NBM8 494 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 SLC26A7Q8TE54 656 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 ASZ1Q8WWH4 475 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 KCNH6Q9H252 994 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 SPAG4Q9NPE6 437 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 MRPL40Q9NQ50 206 aaKnown RBP12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 KLQ9UEF7 1012 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 TRPS1Q9UHF7 1281 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 PILRBQ9UKJ0 227 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 PACSIN3Q9UKS6 424 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 NDUFAF1Q9Y375 327 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 ANGPTL3Q9Y5C1 460 aa12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 DNMT3AQ9Y6K1 912 aaPredicted RBP12.3□□□□□ -0.44
NSMCE1-208ENST00000565070 SPTY2D1-AS1A0A0U1RR47 76 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 E7ENX8 843 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 TLR4O00206 839 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 TRIM38O00635 465 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 ACOT8O14734 319 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 KATNA1O75449 491 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 BCAS2O75934 225 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 CAPN3P20807 821 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 ZFP36L2P47974 494 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 SLC6A12P48065 614 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 HTR6P50406 440 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 ERFP50548 548 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 AP1S2P56377 157 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 NME5P56597 212 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 RCAN2Q14206 197 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 RPS6KA2Q15349 733 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 ATP6AP1LQ52LC2 224 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 PEAR1Q5VY43 1037 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 TLDC1Q6P9B6 456 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 IL27RAQ6UWB1 636 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 SCIMPQ6UWF3 145 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 ENPP7Q6UWV6 458 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 LRRTM4Q86VH4 590 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 RETREG3Q86VR2 466 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 TRAPPC5Q8IUR0 188 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 SFRP1Q8N474 314 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 RASGEF1AQ8N9B8 481 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 CEP76Q8TAP6 659 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 PYDC1Q8WXC3 89 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 ELMO1Q92556 727 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 SCARF2Q96GP6 870 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 GPATCH1Q9BRR8 931 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 TRIM54Q9BYV2 358 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 SLC32A1Q9H598 525 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 NMRK1Q9NWW6 199 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 TMEM181Q9P2C4 612 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 BCAP29Q9UHQ4 241 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 TMEM98Q9Y2Y6 226 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 CCL27Q9Y4X3 112 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 GON4LQ3T8J9 2241 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 PRSS38A1L453 326 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 OR2AG2A6NM03 316 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 NR5A2O00482 541 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 LSM1O15116 133 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 KMOO15229 486 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 NVLO15381 856 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 KCNJ13O60928 360 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 WDR47O94967 919 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 CEACAM5P06731 702 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 HIST1H2AGP0C0S8 130 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 ZNF8P17098 575 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 EPORP19235 508 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 HIST1H2ADP20671 130 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 HMOX2P30519 316 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 ARL1P40616 181 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 BLKP51451 505 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 MS4A2Q01362 244 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 EMX2Q04743 252 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 FLOT2Q14254 428 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 ABRAXAS2Q15018 415 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 ZXDCQ2QGD7 858 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 TMEM220Q6QAJ8 160 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 LRRC70Q7Z2Q7 622 aa12.29□□□□□ -0.44
NSMCE1-208ENST00000565070 PARGQ86W56 976 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms