RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 IGHV4-59P01825 116 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 SPARCP09486 303 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 TRIM49P0CI25 452 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 TRIM49CP0CI26 452 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 CAPN2P17655 700 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 ALDH1B1P30837 517 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 CEACAM8P31997 349 aaPredicted RBP3.76□□□□□ -1.81
CHD9-212ENST00000564641 CD81P60033 236 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 RPS18P62269 152 aaKnown RBP3.76□□□□□ -1.81
CHD9-212ENST00000564641 EPS8Q12929 822 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 ITPK1Q13572 414 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 SYCP1Q15431 976 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 KLHL40Q2TBA0 621 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 ARHGEF16Q5VV41 709 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 ZNF534Q76KX8 674 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 ENOSF1Q7L5Y1 443 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 CPLX4Q7Z7G2 160 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 LSMEM2Q8N112 164 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 L3MBTL4Q8NA19 623 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 ZNRF4Q8WWF5 429 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 ANKRD7Q92527 254 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 USP6NLQ92738 828 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 SNX21Q969T3 373 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 FGFBP2Q9BYJ0 223 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 PITPNM3Q9BZ71 974 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 NYXQ9GZU5 481 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 OLFML3Q9NRN5 406 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 HAUS2Q9NVX0 235 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 SLC7A7Q9UM01 511 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 PIAS3Q9Y6X2 628 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 IBTKQ9P2D0 1353 aaPredicted RBP3.76□□□□□ -1.81
CHD9-212ENST00000564641 PCNTO95613 3336 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 IGHV4-4A0A075B6R2 117 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 IGKV6D-41A0A0C4DH26 115 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 B4DLN1 442 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 IGHDP01880 384 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 TPM3P06753 285 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 NR2F1P10589 423 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 SELLP14151 372 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 PORP16435 677 aaPredicted RBP3.75□□□□□ -1.81
CHD9-212ENST00000564641 TMEM11P17152 192 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 CKMT2P17540 419 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 IL11P20809 199 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 MAPK4P31152 587 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 RGS2P41220 211 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 CSRP3P50461 194 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 RPS3AP61247 264 aaKnown RBP3.75□□□□□ -1.81
CHD9-212ENST00000564641 MAP2K1Q02750 393 aaPredicted RBP3.75□□□□□ -1.81
CHD9-212ENST00000564641 AIMP2Q13155 320 aaKnown RBP3.75□□□□□ -1.81
CHD9-212ENST00000564641 WTAPQ15007 396 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 MEP1AQ16819 746 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 ZSCAN23Q3MJ62 389 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 DUSP28Q4G0W2 176 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 PWWP2BQ6NUJ5 590 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 BHLHB9Q6PI77 547 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 GLDNQ6ZMI3 551 aaPredicted RBP3.75□□□□□ -1.81
CHD9-212ENST00000564641 PRPF39Q86UA1 669 aaKnown RBP3.75□□□□□ -1.81
CHD9-212ENST00000564641 NBPF5PQ86XG9 351 aaPredicted RBP3.75□□□□□ -1.81
CHD9-212ENST00000564641 FRMD1Q8N878 549 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 GSDMBQ8TAX9 411 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 GRHL3Q8TE85 626 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 PIBF1Q8WXW3 757 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 FAM120BQ96EK7 910 aaKnown RBP3.75□□□□□ -1.81
CHD9-212ENST00000564641 IWS1Q96ST2 819 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 GFI1Q99684 422 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 SYT15Q9BQS2 421 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 SEMA6AQ9H2E6 1030 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 KAT14Q9H8E8 782 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 EIF2B3Q9NR50 452 aaKnown RBP3.75□□□□□ -1.81
CHD9-212ENST00000564641 PLCXD1Q9NUJ7 323 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 LIMA1Q9UHB6 759 aaKnown RBP3.75□□□□□ -1.81
CHD9-212ENST00000564641 SNX8Q9Y5X2 465 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 SBF1O95248 1867 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 NPC1L1Q9UHC9 1359 aa3.75□□□□□ -1.81
CHD9-212ENST00000564641 SCN4AP35499 1836 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 MYH14Q7Z406 1995 aaKnown RBP3.74□□□□□ -1.81
CHD9-212ENST00000564641 SOS1Q07889 1333 aaPredicted RBP3.74□□□□□ -1.81
CHD9-212ENST00000564641 MRC1P22897 1456 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 A0A1W2PRQ8 180 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 ERICH4A6NGS2 130 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 OR6C76A6NM76 312 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 J3QR06 171 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 KDM6AO15550 1401 aaPredicted RBP3.74□□□□□ -1.81
CHD9-212ENST00000564641 PLPP2O43688 288 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 HTATSF1O43719 755 aaKnown RBP3.74□□□□□ -1.81
CHD9-212ENST00000564641 GPC4O75487 556 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 TRMUO75648 421 aaKnown RBP3.74□□□□□ -1.81
CHD9-212ENST00000564641 RAF1P04049 648 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 TPOP07202 933 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 CCDC172P0C7W6 258 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 CSH1P0DML2 217 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 CSH2P0DML3 217 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 AZU1P20160 251 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 CALRP27797 417 aaKnown RBP3.74□□□□□ -1.81
CHD9-212ENST00000564641 ACADLP28330 430 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 MSH2P43246 934 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 GPR143P51810 404 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 PRELPP51888 382 aa3.74□□□□□ -1.81
CHD9-212ENST00000564641 THOP1P52888 689 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms