RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 TMIGD2Q96BF3 282 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 SCRN2Q96FV2 425 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 TMEM74Q96NL1 305 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 CASD1Q96PB1 797 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 EPYCQ99645 322 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 ZCCHC2Q9C0B9 1178 aaKnown RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 MMP27Q9H306 513 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 EHD1Q9H4M9 534 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 RUBCNLQ9H714 662 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 IL1RAPQ9NPH3 570 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 AASDHPPTQ9NRN7 309 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 GPRC5BQ9NZH0 403 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 LHX3Q9UBR4 397 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 BTNL2Q9UIR0 455 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 VPS4AQ9UN37 437 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 CDC14AQ9UNH5 594 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 COQ6Q9Y2Z9 468 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 PPIL1Q9Y3C6 166 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 DOCK4Q8N1I0 1966 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 TRIP12Q14669 1992 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 A0A1W2PPW3 197 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 LRRC14BA6NHZ5 514 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 TBKBP1A7MCY6 615 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 AGAP14A8MT82 685 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 LOC730098B7Z3J9 87 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 CACNB4O00305 520 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 PPP6CO00743 305 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 GRM6O15303 877 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 SUV39H1O43463 412 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 NOBOXO60393 691 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 OR1I1O60431 355 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 EFCAB14O75071 495 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 GABARAPO95166 117 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 ATE1O95260 518 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 SERPINA1P01009 418 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 APOA1P02647 267 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 C9P02748 559 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 SOD2P04179 222 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 URODP06132 367 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 GSNP06396 782 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 RB1P06400 928 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 ABCB1P08183 1280 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 JUPP14923 745 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 XPAP23025 273 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 IGFBP6P24592 240 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 DDX6P26196 483 aaKnown RBP eCLIP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 PPM1AP35813 382 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 UGT2B10P36537 528 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 ANXA11P50995 505 aaKnown RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 HK3P52790 923 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 PLA2G16P53816 162 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 SMIM11AP58511 58 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 DCDC1P59894 354 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 ARF5P84085 180 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 ECT2LQ008S8 904 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 IRF8Q02556 426 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 PCDH1Q08174 1060 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 RIPPLY1Q0D2K3 151 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 MTAPQ13126 283 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 FADDQ13158 208 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 KIAA0040Q15053 153 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 VMACQ2NL98 169 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 ZIK1Q3SY52 487 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 TOR1AIP1Q5JTV8 583 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 SPANXN4Q5MJ08 99 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 LDLRAP1Q5SW96 308 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 MLIPQ5VWP3 458 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 KIAA1614Q5VZ46 1190 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 FRG2Q64ET8 278 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 CAPN13Q6MZZ7 669 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 CXorf57Q6NSI4 855 aaKnown RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 TRIM40Q6P9F5 258 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 BRAT1Q6PJG6 821 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 FAM151BQ6UXP7 276 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 DCDC5Q6ZRR9 648 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 CCDC149Q6ZUS6 474 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 KRT73Q86Y46 540 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 DCP2Q8IU60 420 aaKnown RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 LACC1Q8IV20 430 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 FAM217AQ8IXS0 508 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 TTC29Q8NA56 475 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 ATG16L2Q8NAA4 619 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 GALNT6Q8NCL4 622 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 ZNF540Q8NDQ6 660 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 CHDHQ8NE62 594 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 FIBINQ8TAL6 211 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 PHF10Q8WUB8 498 aaKnown RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 PPP1R13LQ8WUF5 828 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 CHTF18Q8WVB6 975 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 SKA2Q8WVK7 121 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 PIH1D2Q8WWB5 315 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 RASSF5Q8WWW0 418 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 FBXL8Q96CD0 374 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 MTERF3Q96E29 417 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 TMEM169Q96HH4 297 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 LRIG1Q96JA1 1093 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 FRG2BQ96QU4 278 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 PANX1Q96RD7 426 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 CPPED1Q9BRF8 314 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 GPR62Q9BZJ7 368 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms