RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 NEPROQ6NW34 567 aa14.38□□□□□ -0.11
SPG7-210ENST00000564409 NEK10Q6ZWH5 1172 aa14.38□□□□□ -0.11
SPG7-210ENST00000564409 PPP1R32Q7Z5V6 425 aa14.38□□□□□ -0.11
SPG7-210ENST00000564409 LMNTD2Q8IXW0 634 aa14.38□□□□□ -0.11
SPG7-210ENST00000564409 C2orf73Q8N5S3 287 aaPredicted RBP14.38□□□□□ -0.11
SPG7-210ENST00000564409 RBMXL3Q8N7X1 1067 aaKnown RBP14.38□□□□□ -0.11
SPG7-210ENST00000564409 PRELID2Q8N945 189 aa14.38□□□□□ -0.11
SPG7-210ENST00000564409 XAB2Q9HCS7 855 aaKnown RBP14.38□□□□□ -0.11
SPG7-210ENST00000564409 UTP6Q9NYH9 597 aaKnown RBP14.38□□□□□ -0.11
SPG7-210ENST00000564409 CNTRLQ7Z7A1 2325 aa14.38□□□□□ -0.11
SPG7-210ENST00000564409 PCSK5Q92824 1860 aa14.38□□□□□ -0.11
SPG7-210ENST00000564409 MAST4O15021 2626 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 MDC1Q14676 2089 aaKnown RBP14.37□□□□□ -0.11
SPG7-210ENST00000564409 FAM237BA0A1B0GVD1 139 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 SDR42E2A6NKP2 422 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 CNOT3O75175 753 aaKnown RBP14.37□□□□□ -0.11
SPG7-210ENST00000564409 CTSBP07858 339 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 UMODP07911 640 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 ERGP11308 486 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 CHRM3P20309 590 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 CMPK1P30085 196 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 GPS1Q13098 491 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 TTLL9Q3SXZ7 439 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 FHL5Q5TD97 284 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 PRMT9Q6P2P2 845 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 TAX1BP1Q86VP1 789 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 CILP2Q8IUL8 1156 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 FAM20CQ8IXL6 584 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 IQCKQ8N0W5 287 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 MCUQ8NE86 351 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 OR2L3Q8NG85 312 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 OR2A1Q8NGT9 310 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 COG1Q8WTW3 980 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 PBKQ96KB5 322 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 PSMG3-AS1Q96PY0 264 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 SEMA3GQ9NS98 782 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 SLC22A11Q9NSA0 550 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 B3GNT3Q9Y2A9 372 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 KLHL20Q9Y2M5 609 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 JRKLQ9Y4A0 524 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 NFS1Q9Y697 457 aa14.37□□□□□ -0.11
SPG7-210ENST00000564409 E5RI56 91 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 PSIP1O75475 530 aaKnown RBP14.36□□□□□ -0.11
SPG7-210ENST00000564409 KRT14P02533 472 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 CATP04040 527 aaKnown RBP14.36□□□□□ -0.11
SPG7-210ENST00000564409 PKMP14618 531 aaKnown RBP14.36□□□□□ -0.11
SPG7-210ENST00000564409 CXCR5P32302 372 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 BDKRB1P46663 353 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 RELAQ04206 551 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 SLC9A5Q14940 896 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 NKG7Q16617 165 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 IRAK1BP1Q5VVH5 260 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 CASC4Q6P4E1 433 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 CNSTQ6PJW8 725 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 RNF44Q7L0R7 432 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 RASGEF1CQ8N431 466 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 ZADH2Q8N4Q0 377 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 Q8NA96 180 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 FBXO15Q8NCQ5 510 aaPredicted RBP14.36□□□□□ -0.11
SPG7-210ENST00000564409 OR9A1PQ8NGU1 263 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 SMPDL3AQ92484 453 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 MAGOHBQ96A72 148 aaKnown RBP14.36□□□□□ -0.11
SPG7-210ENST00000564409 MIPEPQ99797 713 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 ZNF552Q9H707 407 aaPredicted RBP14.36□□□□□ -0.11
SPG7-210ENST00000564409 CUEDC1Q9NWM3 386 aaPredicted RBP14.36□□□□□ -0.11
SPG7-210ENST00000564409 CIDEBQ9UHD4 219 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 CRYL1Q9Y2S2 319 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 PPP2R2CQ9Y2T4 447 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 COMMD10Q9Y6G5 202 aa14.36□□□□□ -0.11
SPG7-210ENST00000564409 USP9YO00507 2555 aaPredicted RBP14.36□□□□□ -0.11
SPG7-210ENST00000564409 USP9XQ93008 2570 aaPredicted RBP14.35□□□□□ -0.11
SPG7-210ENST00000564409 COL12A1Q99715 3063 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 A0A1W2PPV9 198 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 TCRBV7S3A2A0A539 114 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 HYKKA2RU49 373 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 OR2A25A4D2G3 310 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 VSTM2BA6NLU5 285 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 MYO1CO00159 1063 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 CTSVO60911 334 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 NIPSNAP2O75323 286 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 VPS26AO75436 327 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 CCNDBP1O95273 360 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 GNLYP22749 145 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 CARSP49589 748 aaKnown RBP14.35□□□□□ -0.11
SPG7-210ENST00000564409 VSX2P58304 361 aaPredicted RBP14.35□□□□□ -0.11
SPG7-210ENST00000564409 CCZ1BP86790 482 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 CCZ1P86791 482 aaPredicted RBP14.35□□□□□ -0.11
SPG7-210ENST00000564409 DHX34Q14147 1143 aaKnown RBP14.35□□□□□ -0.11
SPG7-210ENST00000564409 CYP1B1Q16678 543 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 MUM1Q2TAK8 710 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 WASHC2DQ5SRD0 308 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 PRAMEF13Q5VWM6 474 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 CES3Q6UWW8 571 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 CENPUQ71F23 418 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 CAND1Q86VP6 1230 aaKnown RBP14.35□□□□□ -0.11
SPG7-210ENST00000564409 CALML6Q8TD86 181 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 MVB12AQ96EY5 273 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 SPSB2Q99619 263 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 ZFYVE21Q9BQ24 234 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 CCDC68Q9H2F9 335 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms