RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	BTBD8	Q5XKL5	378 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ZBTB33	Q86T24	672 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TSNAX	Q99598	290 aa	Known RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ZCCHC2	Q9C0B9	1178 aa	Known RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SIGLEC6	O43699	453 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	DGKG	P49619	791 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	FGFBP1	Q14512	234 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	RNF219	Q5W0B1	726 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	DUSP22	Q9NRW4	184 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	PCDHGA7	Q9Y5G6	932 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CXorf49	A8MYA2	514 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ZNF14	P17017	642 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ADORA2A	P29274	412 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CHI3L1	P36222	383 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SMTNL2	Q2TAL5	461 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SORCS2	Q96PQ0	1159 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SPDYE2B	A6NHP3	402 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288		H3BN98	237 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SOCS2	O14508	198 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SPDYE6	P0CI01	402 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	VAMP1	P23763	118 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TEK	Q02763	1124 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SPDYE7P	Q495Y7	208 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SPDYE2	Q495Y8	402 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CGB2	Q6NT52	195 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	GRIN3A	Q8TCU5	1115 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ACKR2	O00590	384 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ZNF780A	O75290	641 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	MATN4	O95460	622 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	AP2A1	O95782	977 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	NRIP1	P48552	1158 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	VARS2	Q5ST30	1063 aa	Known RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	FAM205BP	Q63HN1	556 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CSGALNACT1	Q8TDX6	532 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	MYH7	P12883	1935 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CXorf51A	A0A1B0GTR3	108 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	KIAA0513	O60268	411 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TF	P02787	698 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CSF2	P04141	144 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	RPN2	P04844	631 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	DDC	P20711	480 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC2A5	P22732	501 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ADRA1B	P35368	520 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	GPR50	Q13585	617 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	UQCC3	Q6UW78	93 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SKA3	Q8IX90	412 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	OR52K1	Q8NGK4	314 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	C11orf24	Q96F05	449 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	C1orf109	Q9NX04	203 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	MT-ND1	P03886	318 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	MARCKSL1	P49006	195 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TGM4	P49221	684 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	POLR2G	P62487	172 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	C2orf80	Q0P641	193 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CPTP	Q5TA50	214 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SH2D5	Q6ZV89	423 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	OR5T1	Q8NG75	326 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	IL1RAP	Q9NPH3	570 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CACNA1C	Q13936	2221 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TSTD3	H0UI37	97 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CHRM5	P08912	532 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ETV5	P41161	510 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	PTS	Q03393	145 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	AIMP2	Q13155	320 aa	Known RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	FASTKD3	Q14CZ7	662 aa	Known RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	UGT3A2	Q3SY77	523 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ZCCHC12	Q6PEW1	402 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ZFP42	Q96MM3	310 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	B3GNT5	Q9BYG0	378 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	INIP	Q9NRY2	104 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CRYL1	Q9Y2S2	319 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CACNB4	O00305	520 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SMIM18	P0DKX4	95 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	GHRHR	Q02643	423 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CLC	Q05315	142 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	PTPN11	Q06124	597 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	REP15	Q6BDI9	236 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	RERGL	Q9H628	205 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288		M0R2N6	131 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ARPC2	O15144	300 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TGOLN2	O43493	480 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CHP2	O43745	196 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ARIH2	O95376	493 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SAG	P10523	405 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	JUND	P17535	347 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ELK4	P28324	431 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC9B1	Q4ZJI4	515 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC7A6	Q92536	515 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	MS4A12	Q9NXJ0	267 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TEX13C	A0A0J9YWL9	993 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	LOC285095	A0A1B0GVY8	99 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TACSTD2	P09758	323 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	AHSA2	Q719I0	299 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	LMO3	Q8TAP4	145 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SARDH	Q9UL12	918 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	FAM95C	A0A1B0GW59	222 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SOX11	P35716	441 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	GLRB	P48167	497 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SSX9	Q7RTT3	188 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms