RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ZNF572Q7Z3I7 529 aaPredicted RBP15.27■□□□□ 0.04
RNF40-205ENST00000563909 LINC00523Q86TU6 105 aa15.27■□□□□ 0.04
RNF40-205ENST00000563909 TAB3Q8N5C8 712 aaPredicted RBP15.27■□□□□ 0.04
RNF40-205ENST00000563909 LCN9Q8WX39 176 aa15.27■□□□□ 0.04
RNF40-205ENST00000563909 TBL1YQ9BQ87 522 aa15.27■□□□□ 0.04
RNF40-205ENST00000563909 BPIFA1Q9NP55 256 aa15.27■□□□□ 0.04
RNF40-205ENST00000563909 SLC22A11Q9NSA0 550 aa15.27■□□□□ 0.04
RNF40-205ENST00000563909 RPH3AQ9Y2J0 694 aaPredicted RBP15.27■□□□□ 0.04
RNF40-205ENST00000563909 MRFAP1Q9Y605 127 aa15.27■□□□□ 0.04
RNF40-205ENST00000563909 COLEC10Q9Y6Z7 277 aa15.27■□□□□ 0.04
RNF40-205ENST00000563909 NBEAL1Q6ZS30 2694 aa15.27■□□□□ 0.03
RNF40-205ENST00000563909 ESPNB1AK53 854 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 H3BMH7 237 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 BTN3A3O00478 584 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 AURKAO14965 403 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 HCRTR1O43613 425 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 WISP2O76076 250 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 RASAL1O95294 804 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 AGTP01019 485 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 FOSL1P15407 271 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 ADRA1AP35348 466 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 BASP1P80723 227 aaKnown RBP15.26■□□□□ 0.03
RNF40-205ENST00000563909 DR1Q01658 176 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 GPS1Q13098 491 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 DHX34Q14147 1143 aaKnown RBP15.26■□□□□ 0.03
RNF40-205ENST00000563909 LONRF1Q17RB8 773 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 DEFB110Q30KQ9 67 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 SIRPB2Q5JXA9 342 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 Q71RC1 249 aaPredicted RBP15.26■□□□□ 0.03
RNF40-205ENST00000563909 TMEM200AQ86VY9 491 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 SLC25A41Q8N5S1 370 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 ZNF655Q8N720 491 aaPredicted RBP15.26■□□□□ 0.03
RNF40-205ENST00000563909 BEND7Q8N7W2 519 aaPredicted RBP15.26■□□□□ 0.03
RNF40-205ENST00000563909 KRT12Q99456 494 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.26■□□□□ 0.03
RNF40-205ENST00000563909 FAM60AQ9NP50 221 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 DLL4Q9NR61 685 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 MEMO1Q9Y316 297 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 DNMT3AQ9Y6K1 912 aaPredicted RBP15.26■□□□□ 0.03
RNF40-205ENST00000563909 ANKRD12Q6UB98 2062 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 COL6A5A8TX70 2615 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 ABCA4P78363 2273 aa15.26■□□□□ 0.03
RNF40-205ENST00000563909 OR2AG2A6NM03 316 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 ZSCAN9O15535 394 aaPredicted RBP15.25■□□□□ 0.03
RNF40-205ENST00000563909 F10P00742 488 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 CTSBP07858 339 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 VPS41P49754 854 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 PTK6Q13882 451 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 SPARCL1Q14515 664 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 SHISA6Q6ZSJ9 500 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 NCCRP1Q6ZVX7 275 aaPredicted RBP15.25■□□□□ 0.03
RNF40-205ENST00000563909 MAATS1Q7Z4T9 603 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 MNS1Q8NEH6 495 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 OR11G2Q8NGC1 345 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 MAGED4Q96JG8 741 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 NRTNQ99748 197 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 ZCCHC2Q9C0B9 1178 aaKnown RBP15.25■□□□□ 0.03
RNF40-205ENST00000563909 TRABDQ9H4I3 376 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 ARNT2Q9HBZ2 717 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 EIF2B3Q9NR50 452 aaKnown RBP15.25■□□□□ 0.03
RNF40-205ENST00000563909 CCM2LQ9NUG4 571 aaPredicted RBP15.25■□□□□ 0.03
RNF40-205ENST00000563909 HACD3Q9P035 362 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 FAM8A1Q9UBU6 413 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 ACSL5Q9ULC5 683 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 SPO11Q9Y5K1 396 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 STAB1Q9NY15 2570 aa15.25■□□□□ 0.03
RNF40-205ENST00000563909 C17orf113A0A1B0GUU1 675 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 BTN3A1O00481 513 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 SUN1O94901 812 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 APRTP07741 180 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 SLC35G4P0C7Q5 338 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 ALAS2P22557 587 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 NDUFS1P28331 727 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 HMGCLP35914 325 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 CHRNA4P43681 627 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 CDK16Q00536 496 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 C2orf54Q08AI8 447 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 FNBP1LQ5T0N5 605 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 PPP1R21Q6ZMI0 780 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 ACVR1CQ8NER5 493 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 CA5BP1Q8WTZ4 195 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 HAS2Q92819 552 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 VPS50Q96JG6 964 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 APOL2Q9BQE5 337 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 MRM3Q9HC36 420 aaKnown RBP15.24■□□□□ 0.03
RNF40-205ENST00000563909 IL26Q9NPH9 171 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 IRAK4Q9NWZ3 460 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 PTGFRNQ9P2B2 879 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 ASIC3Q9UHC3 531 aa15.24■□□□□ 0.03
RNF40-205ENST00000563909 FAM187AA6NFU0 413 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 AP3B1O00203 1094 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 UGT1A9O60656 530 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 UGT1A6P19224 532 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 TPSB2P20231 275 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 UGT1A1P22309 533 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 UGT1A4P22310 534 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 SARNPP82979 210 aaKnown RBP15.23■□□□□ 0.03
RNF40-205ENST00000563909 TMPRSS15P98073 1019 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 CDH17Q12864 832 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 OLIG2Q13516 323 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms