RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 ST3GAL4Q11206 333 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 DMC1Q14565 340 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 TATDN3Q17R31 274 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 GFM1Q96RP9 751 aaKnown RBP12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 MED10Q9BTT4 135 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 NUSAP1Q9BXS6 441 aaKnown RBP12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 MAGIXQ9H6Y5 334 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 ZNF224Q9NZL3 707 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 SPASTQ9UBP0 616 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 GINS2Q9Y248 185 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 PCDHGA6Q9Y5G7 932 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 CLCA1A8K7I4 914 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 KERAO60938 352 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 STAU1O95793 577 aaKnown RBP12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 SLC2A3P11169 496 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 HOXD10P28358 340 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 CCR1P32246 355 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 RPS19P39019 145 aaKnown RBP12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 KIR2DL3P43628 341 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 RPL34P49207 117 aaKnown RBP12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 MXD1Q05195 221 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 FOXD4Q12950 439 aaPredicted RBP12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 LAMTOR1Q6IAA8 161 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 VTCN1Q7Z7D3 282 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 TCTE3Q8IZS6 198 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 KRTCAP2Q8N6L1 136 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 GALNT11Q8NCW6 608 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 NLGN4YQ8NFZ3 816 aaPredicted RBP12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 NTAN1Q96AB6 310 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 DACT3Q96B18 629 aaPredicted RBP12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 ZBTB18Q99592 522 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 TSPAN1O60635 241 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 RHOBTB1O94844 696 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 USP17L7P0C7H9 530 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 DDCP20711 480 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 CCNCP24863 283 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 DNAJA1P31689 397 aaKnown RBP12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 ICAM3P32942 547 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 PIK3CGP48736 1102 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 SETMARQ53H47 684 aaPredicted RBP12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 PDZK1Q5T2W1 519 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 DCAF15Q66K64 600 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 ANKRD46Q86W74 232 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 TMC8Q8IU68 726 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 SLC44A2Q8IWA5 706 aaPredicted RBP12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 RHEBL1Q8TAI7 183 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 SLC9A7Q96T83 725 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 ASPNQ9BXN1 380 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 SRRQ9GZT4 340 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 TFB2MQ9H5Q4 396 aaKnown RBP12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 ZC4H2Q9NQZ6 224 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 ASAH2Q9NR71 780 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 NDFIP2Q9NV92 336 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 C1orf109Q9NX04 203 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 EIF3KQ9UBQ5 218 aaKnown RBP12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 PCTPQ9UKL6 214 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 CLCA3PQ9Y6N3 262 aa12.04□□□□□ -0.48
SCAMP2-204ENST00000563829 MUSKO15146 869 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 CD3EAPO15446 510 aaKnown RBP12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 SLC7A4O43246 635 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 MAFKO60675 156 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 RPS17P08708 135 aaKnown RBP12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 RPS3P23396 243 aaKnown RBP eCLIP12.03□□□□□ -0.487e-8■■■■□ 22.2
SCAMP2-204ENST00000563829 CSTF2P33240 577 aaKnown RBP eCLIP12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 ERVPABLB-1P60509 514 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 TNK1Q13470 666 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 VEPH1Q14D04 833 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 PLET1Q6UQ28 207 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 DNAJC22Q8N4W6 341 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 OR56A4Q8NGH8 313 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 TSGA13Q96PP4 275 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 BARHL1Q9BZE3 327 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 SLC39A8Q9C0K1 460 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 OLA1Q9NTK5 396 aaKnown RBP12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 B3GNT2Q9NY97 397 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 OGDHLQ9ULD0 1010 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 BTAF1O14981 1849 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 GRXCR2A6NFK2 248 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 GFRA2O00451 464 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 SCAMP3O14828 347 aaKnown RBP12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 GLP2RO95838 553 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 C1QBP02746 253 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 ALPPP05187 535 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 TNNI3P19429 210 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 FPR1P21462 350 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 MRPL19P49406 292 aaKnown RBP12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 VLDLRP98155 873 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 LETMD1Q6P1Q0 360 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 FAM171BQ6P995 826 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 TIGD4Q8IY51 512 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 RDH10Q8IZV5 341 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 CRYBG2Q8N1P7 616 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 KIAA1191Q96A73 305 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 TMEM80Q96HE8 168 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 C8orf48Q96LL4 319 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 SLC2A13Q96QE2 648 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 OR52E6Q96RD3 313 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 TM9SF2Q99805 663 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 DUSP16Q9BY84 665 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 RERGLQ9H628 205 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms