RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 DEPDC1BQ8WUY9 529 aa5.04□□□□□ -1.6
LINC00557-201ENST00000563184 DNASE2BQ8WZ79 361 aa5.04□□□□□ -1.6
LINC00557-201ENST00000563184 PROX1Q92786 737 aa5.04□□□□□ -1.6
LINC00557-201ENST00000563184 INTS14Q96SY0 518 aa5.04□□□□□ -1.6
LINC00557-201ENST00000563184 TRPV4Q9HBA0 871 aa5.04□□□□□ -1.6
LINC00557-201ENST00000563184 XAB2Q9HCS7 855 aaKnown RBP5.04□□□□□ -1.6
LINC00557-201ENST00000563184 FAM207AQ9NSI2 230 aaPredicted RBP5.04□□□□□ -1.6
LINC00557-201ENST00000563184 INTS9Q9NV88 658 aaKnown RBP5.04□□□□□ -1.6
LINC00557-201ENST00000563184 P4HTMQ9NXG6 502 aa5.04□□□□□ -1.6
LINC00557-201ENST00000563184 SNX7Q9UNH6 387 aa5.04□□□□□ -1.6
LINC00557-201ENST00000563184 KCNJ14Q9UNX9 436 aa5.04□□□□□ -1.6
LINC00557-201ENST00000563184 POMT1Q9Y6A1 747 aa5.04□□□□□ -1.6
LINC00557-201ENST00000563184 MYH14Q7Z406 1995 aaKnown RBP5.04□□□□□ -1.6
LINC00557-201ENST00000563184 TRAV24A0A0B4J272 114 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 ARHGEF37A1IGU5 675 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 HTR3EA5X5Y0 456 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 BLOC1S5-TXNDC5H3BN57 136 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 CAVIN2O95810 425 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 CLPTM1O96005 669 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 AMBPP02760 352 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 PRSS56P0CW18 603 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 NKX2-1P43699 371 aaPredicted RBP5.03□□□□□ -1.6
LINC00557-201ENST00000563184 VAMP7P51809 220 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 BMXP51813 675 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 PTENP60484 403 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 IRX6P78412 446 aaPredicted RBP5.03□□□□□ -1.6
LINC00557-201ENST00000563184 BFSP1Q12934 665 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 TUBB2AQ13885 445 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 SQLEQ14534 574 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 TAF13Q15543 124 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 PTGISQ16647 500 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 CTU2Q2VPK5 515 aaKnown RBP5.03□□□□□ -1.6
LINC00557-201ENST00000563184 ALDH1L2Q3SY69 923 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 SUSD4Q5VX71 490 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 ARHGAP17Q68EM7 881 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 ENPP7Q6UWV6 458 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 ANKRD23Q86SG2 305 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 HPSE2Q8WWQ2 592 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 ST6GALNAC6Q969X2 333 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 FAM162AQ96A26 154 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 FERMT1Q9BQL6 677 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 TUBB2BQ9BVA1 445 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 PRRG4Q9BZD6 226 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 CPVLQ9H3G5 476 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 GSN-AS1Q9NRJ2 163 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 TXNDC16Q9P2K2 825 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 TCF19Q9Y242 345 aa5.03□□□□□ -1.6
LINC00557-201ENST00000563184 GPIP06744 558 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 TCEA1P23193 301 aaKnown RBP5.02□□□□□ -1.61
LINC00557-201ENST00000563184 CDKN1AP38936 164 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 MTCP1P56278 107 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 TUBB4BP68371 445 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 POU5F1Q01860 360 aaKnown RBP5.02□□□□□ -1.61
LINC00557-201ENST00000563184 RASGEF1BQ0VAM2 473 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 UGCGQ16739 394 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 PHKG1Q16816 387 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 C9orf50Q5SZB4 431 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 TMEM182Q6ZP80 229 aaPredicted RBP5.02□□□□□ -1.61
LINC00557-201ENST00000563184 KLHDC8BQ8IXV7 354 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 OR8H3Q8N146 312 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 OR4C3Q8NH37 302 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 GOT1L1Q8NHS2 421 aaPredicted RBP5.02□□□□□ -1.61
LINC00557-201ENST00000563184 C9orf43Q8TAL5 461 aaPredicted RBP5.02□□□□□ -1.61
LINC00557-201ENST00000563184 KCNE4Q8WWG9 221 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 RAD54LQ92698 747 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 CORO2AQ92828 525 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 MR1Q95460 341 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 F2RL3Q96RI0 385 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 GTPBP2Q9BX10 602 aaKnown RBP5.02□□□□□ -1.61
LINC00557-201ENST00000563184 ZNF71Q9NQZ8 489 aaPredicted RBP5.02□□□□□ -1.61
LINC00557-201ENST00000563184 DNAJB9Q9UBS3 223 aa5.02□□□□□ -1.61
LINC00557-201ENST00000563184 STK36Q9NRP7 1315 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 PCDH7O60245 1069 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 DFFBO76075 338 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 DARSP14868 501 aaKnown RBP5.01□□□□□ -1.61
LINC00557-201ENST00000563184 HSD17B3P37058 310 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 WNT5AP41221 380 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 RPL21P46778 160 aaKnown RBP5.01□□□□□ -1.61
LINC00557-201ENST00000563184 RGS7P49802 495 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 KLC1Q07866 573 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 TAZQ16635 292 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 FAM174BQ3ZCQ3 159 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 CCDC184Q52MB2 194 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 SLC35D3Q5M8T2 416 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 OR4A47Q6IF82 309 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 MOXD1Q6UVY6 613 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 PET117Q6UWS5 81 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 SH2D5Q6ZV89 423 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 OR2T11Q8NH01 316 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 HEXDCQ8WVB3 486 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 HES6Q96HZ4 224 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 CITED2Q99967 270 aaPredicted RBP5.01□□□□□ -1.61
LINC00557-201ENST00000563184 PIGQQ9BRB3 760 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 INPP5KQ9BT40 448 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 THUMPD3Q9BV44 507 aaKnown RBP5.01□□□□□ -1.61
LINC00557-201ENST00000563184 ZMYND12Q9H0C1 365 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 LMAN1LQ9HAT1 526 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 GTF3C4Q9UKN8 822 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 C2CD2Q9Y426 696 aa5.01□□□□□ -1.61
LINC00557-201ENST00000563184 GIMAP1-GIMAP5A0A087WTJ2 511 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms