RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 MID2Q9UJV3 735 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 DMXL1Q9Y485 3027 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 A0A1W2PPV9 198 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 A8MU76 341 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 MAP3K7O43318 606 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 JUPP14923 745 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 PSMB5P28074 263 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 CCKBRP32239 447 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 KCNC1P48547 511 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 ARL4DP49703 201 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 CLDN6P56747 220 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 C16orf46Q6P387 395 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 ZNF574Q6ZN55 896 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-207ENST00000563109 DCBLD1Q8N8Z6 715 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 BANPQ8N9N5 519 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 CCDC63Q8NA47 563 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 OR56A3Q8NH54 315 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 GRAMD1AQ96CP6 724 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 MAP3K3Q99759 626 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 MIPEPQ99797 713 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 HAUS8Q9BT25 410 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 ACAT2Q9BWD1 397 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 TWSG1Q9GZX9 223 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 PDP2Q9P2J9 529 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 TAC3Q9UHF0 121 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 ACTL7BQ9Y614 415 aa18.16■□□□□ 0.5
RAB40C-207ENST00000563109 PRICKLE3O43900 615 aaPredicted RBP18.15■□□□□ 0.5
RAB40C-207ENST00000563109 SPAG7O75391 227 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 WDR47O94967 919 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 ANKRD34CP0C6C1 535 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 PDX1P52945 283 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 ALDH18A1P54886 795 aaKnown RBP18.15■□□□□ 0.5
RAB40C-207ENST00000563109 ZFP36L1Q07352 338 aaKnown RBP18.15■□□□□ 0.5
RAB40C-207ENST00000563109 PFKFB4Q16877 469 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 ISXQ2M1V0 245 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 PTCHD3Q3KNS1 767 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 LCTLQ6UWM7 567 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 CDHR3Q6ZTQ4 885 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 RAB44Q7Z6P3 723 aaPredicted RBP18.15■□□□□ 0.5
RAB40C-207ENST00000563109 B3GNT8Q7Z7M8 397 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 TRIM73Q86UV7 250 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 LRRC56Q8IYG6 542 aaPredicted RBP18.15■□□□□ 0.5
RAB40C-207ENST00000563109 CACTIN-AS1Q8N1I8 211 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 OR2L3Q8NG85 312 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 UBTD2Q8WUN7 234 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 PYCR2Q96C36 320 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 TMEM79Q9BSE2 394 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 SGPP1Q9BX95 441 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 PITPNM3Q9BZ71 974 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 ZNF768Q9H5H4 540 aaKnown RBP18.15■□□□□ 0.5
RAB40C-207ENST00000563109 SSU72Q9NP77 194 aaKnown RBP18.15■□□□□ 0.5
RAB40C-207ENST00000563109 SOHLH2Q9NX45 425 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 PTBP2Q9UKA9 531 aaKnown RBP18.15■□□□□ 0.5
RAB40C-207ENST00000563109 DYRK1BQ9Y463 629 aa18.15■□□□□ 0.5
RAB40C-207ENST00000563109 PTPRBP23467 1997 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 AGPSO00116 658 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 MAP2K7O14733 419 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 HGSO14964 777 aaPredicted RBP18.14■□□□□ 0.49
RAB40C-207ENST00000563109 KIF1CO43896 1103 aaKnown RBP18.14■□□□□ 0.49
RAB40C-207ENST00000563109 STK16O75716 305 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 ZBTB11O95625 1053 aaPredicted RBP18.14■□□□□ 0.49
RAB40C-207ENST00000563109 MTHFD2P13995 350 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 CSTF2P33240 577 aaKnown RBP eCLIP18.14■□□□□ 0.49
RAB40C-207ENST00000563109 GGT5P36269 586 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 SLC6A12P48065 614 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 HSPA7P48741 367 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 ABATP80404 500 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 FOXC1Q12948 553 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 SETDB1Q15047 1291 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 TNFAIP8L3Q5GJ75 292 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 AGBL2Q5U5Z8 902 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 ICE2Q659A1 982 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 LRRC70Q7Z2Q7 622 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 EXOC3L1Q86VI1 746 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 THOC6Q86W42 341 aaKnown RBP18.14■□□□□ 0.49
RAB40C-207ENST00000563109 C17orf64Q86WR6 236 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 KMT5CQ86Y97 462 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 KLHDC8AQ8IYD2 350 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 CHCHD4Q8N4Q1 142 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 PTGR2Q8N8N7 351 aaPredicted RBP18.14■□□□□ 0.49
RAB40C-207ENST00000563109 RCBTB1Q8NDN9 531 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 OR2A1Q8NGT9 310 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 FLVCR1-AS1Q8TAF5 88 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 RDH11Q8TC12 318 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 MRPS30Q9NP92 439 aaKnown RBP18.14■□□□□ 0.49
RAB40C-207ENST00000563109 TNPO3Q9Y5L0 923 aaKnown RBP18.14■□□□□ 0.49
RAB40C-207ENST00000563109 PCM1Q15154 2024 aa18.14■□□□□ 0.49
RAB40C-207ENST00000563109 TAPBPO15533 448 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 KLK8O60259 260 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 CCNT2O60583 730 aaKnown RBP18.13■□□□□ 0.49
RAB40C-207ENST00000563109 PLIN3O60664 434 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 PROCP04070 461 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 MYL2P10916 166 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 ATP5F1P24539 256 aaPredicted RBP18.13■□□□□ 0.49
RAB40C-207ENST00000563109 MLLT3P42568 568 aaPredicted RBP18.13■□□□□ 0.49
RAB40C-207ENST00000563109 SEPHS1P49903 392 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 PRDX1Q06830 199 aaKnown RBP18.13■□□□□ 0.49
RAB40C-207ENST00000563109 C18orf21Q32NC0 220 aaPredicted RBP18.13■□□□□ 0.49
RAB40C-207ENST00000563109 TMTC4Q5T4D3 741 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 TMPRSS7Q7RTY8 843 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms