RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 H0Y858 1186 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 LDB2O43679 373 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 PRMT3O60678 531 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 ETV3P41162 512 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 PIK3CBP42338 1070 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 MAPK12P53778 367 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 RAB14P61106 215 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 NFKB2Q00653 900 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 FOXM1Q08050 763 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 ZNF234Q14588 700 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 RSBN1Q5VWQ0 802 aaPredicted RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 RSPO2Q6UXX9 243 aaPredicted RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 TRIM69Q86WT6 500 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 NUDT13Q86X67 352 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 FITM2Q8N6M3 262 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 DENND1AQ8TEH3 1009 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 CYGBQ8WWM9 190 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 CMTM7Q96FZ5 175 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 AP4S1Q9Y587 144 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 PCDHB11Q9Y5F2 797 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 A0A1W2PQU0 124 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 TMCC2O75069 709 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 ARHGEF15O94989 841 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 IFNA16P05015 189 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 UMPSP11172 480 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 PTX3P26022 381 aaPredicted RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 HOXD11P31277 338 aaPredicted RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 GKP32189 559 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 SOX11P35716 441 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 SERPINB10P48595 397 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 SLC7A2P52569 658 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 C5orf22Q49AR2 442 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 ZNF678Q5SXM1 525 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 OTUD1Q5VV17 481 aaPredicted RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 CLEC6AQ6EIG7 209 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 SLC2A7Q6PXP3 512 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 TMEM26Q6ZUK4 368 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 PIM3Q86V86 326 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 HEATR4Q86WZ0 1026 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 SLC30A8Q8IWU4 369 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 SETD7Q8WTS6 366 aaKnown RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 FAM3CQ92520 227 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 ZNF607Q96SK3 696 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 THUMPD1Q9NXG2 353 aaKnown RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 GULP1Q9UBP9 304 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 TRPM7Q96QT4 1865 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 ZNFX1Q9P2E3 1918 aaKnown RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 A0A1W2PP55 124 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 ZSCAN5BA6NJL1 495 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 OR10H2O60403 315 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 ERN1O75460 977 aaKnown RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 ALOX5P09917 674 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 HLA-FP30511 346 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 SEMG2Q02383 582 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 PUDPQ08623 228 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 CCDC85BQ15834 202 aaPredicted RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 ZNF77Q15935 545 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 RFX4Q33E94 735 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 TCHHL1Q5QJ38 904 aaPredicted RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 LIPJQ5W064 366 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 PSAPL1Q6NUJ1 521 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 SHQ1Q6PI26 577 aaKnown RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 SLC9B2Q86UD5 537 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 CCDC28AQ8IWP9 274 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 GALNT4Q8N4A0 578 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 BCL7CQ8WUZ0 217 aaPredicted RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 TADA1Q96BN2 335 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 RNF145Q96MT1 663 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 VPS29Q9UBQ0 182 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 CBY1Q9Y3M2 126 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 ZNF236Q9UL36 1845 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 CLDN4O14493 209 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 GSC2O15499 205 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 ZNF12P17014 697 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 ZNF3P17036 446 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 ATP6V1B2P21281 511 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 TYSND1Q2T9J0 566 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 THOC6Q86W42 341 aaKnown RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 FBXW8Q8N3Y1 598 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 CAMKVQ8NCB2 501 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 CHST14Q8NCH0 376 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 TRPV3Q8NET8 790 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 OR2T12Q8NG77 320 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 ZFPM2Q8WW38 1151 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 DNASE1L2Q92874 299 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 SCAMP4Q969E2 229 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 CCDC90BQ9GZT6 254 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 REEP1Q9H902 201 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 TRNAU1APQ9NX07 287 aaKnown RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 CALML5Q9NZT1 146 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 MARCH4Q9P2E8 410 aaPredicted RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 MRTO4Q9UKD2 239 aaKnown RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 SAMD4AQ9UPU9 718 aaKnown RBP7.36□□□□□ -1.23
TCF4-216ENST00000562680 SLC9A8Q9Y2E8 581 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 COQ6Q9Y2Z9 468 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 SPO11Q9Y5K1 396 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 V9GYQ6 96 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 PARP14Q460N5 1801 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 GRXCR1A8MXD5 290 aa7.36□□□□□ -1.23
TCF4-216ENST00000562680 FOXO6A8MYZ6 492 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms