RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 BTRCQ9Y297 605 aa13.69□□□□□ -0.22
GTF3C1-203ENST00000562609 HSPB11Q9Y547 144 aa13.69□□□□□ -0.22
GTF3C1-203ENST00000562609 SNX8Q9Y5X2 465 aa13.69□□□□□ -0.22
GTF3C1-203ENST00000562609 BET1O15155 118 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 IRAK2O43187 625 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 ETV6P41212 452 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 PPP3CCP48454 512 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 EMX2Q04743 252 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 GBX1Q14549 363 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 NDUFAF5Q5TEU4 345 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 CREB3L2Q70SY1 520 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 PDZD4Q76G19 769 aaPredicted RBP13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 MSANTD3Q96H12 275 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 FAM193BQ96PV7 902 aaPredicted RBP13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 ATXN3LQ9H3M9 355 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 CDH23Q9H251 3354 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 TYW5A2RUC4 315 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 M0R082 166 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 INHAP05111 366 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 AZGP1P25311 298 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 TALDO1P37837 337 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 NPY2RP49146 381 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 RCAN2Q14206 197 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 PON2Q15165 354 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 FAM171A1Q5VUB5 890 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 PAMR1Q6UXH9 720 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 DBF4BQ8NFT6 615 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 PPM1MQ96MI6 270 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 KCNA7Q96RP8 456 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 UQCC2Q9BRT2 126 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 GPR62Q9BZJ7 368 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 OR51E2Q9H255 320 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 CCNB1IP1Q9NPC3 277 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 RASSF1Q9NS23 344 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 LIMD1Q9UGP4 676 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 MUTYHQ9UIF7 546 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 LEF1Q9UJU2 399 aaPredicted RBP13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 SNX7Q9UNH6 387 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 THSD7BQ9C0I4 1608 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 NLRC5Q86WI3 1866 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 CCDC182A6NF36 153 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 TSC22D2O75157 780 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 EEDO75530 441 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 HMBSP08397 361 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 ADORA3P0DMS8 318 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 RHAGQ02094 409 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 MFSD13AQ14CX5 517 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 PIK3R6Q5UE93 754 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 AGAP9Q5VTM2 703 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 LHX8Q68G74 356 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 TMEM65Q6PI78 240 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 MIB1Q86YT6 1006 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 SLC47A1Q96FL8 570 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 TRMOQ9BU70 441 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 ACTR8Q9H981 624 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 ZC4H2Q9NQZ6 224 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 SLC23A1Q9UHI7 598 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 POLG2Q9UHN1 485 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 GPR45Q9Y5Y3 372 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 KCNE2Q9Y6J6 123 aa13.68□□□□□ -0.22
GTF3C1-203ENST00000562609 PTPRDP23468 1912 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 RPLP0P05388 317 aaKnown RBP13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 ZNF37AP17032 561 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 DDCP20711 480 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 MYL9P24844 172 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 AIF1P55008 147 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 CXCR4P61073 352 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 UFM1P61960 85 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 HTRA3P83110 453 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 TNK1Q13470 666 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 TIGD6Q17RP2 521 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 FAM26DQ5JW98 314 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 SYVN1Q86TM6 617 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 SLC22A9Q8IVM8 553 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 OR5K1Q8NHB7 308 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 EXT2Q93063 718 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 FERD3LQ96RJ6 166 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 CHCHD6Q9BRQ6 235 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 ERVMER34-1Q9H9K5 563 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 MID1IP1Q9NPA3 183 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 CREBZFQ9NS37 354 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 ABCC13Q9NSE7 274 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 SERPINF2P08697 491 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 COL6A1P12109 1028 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 IGFBP5P24593 272 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 CSTF2P33240 577 aaKnown RBP eCLIP13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 KRT20P35900 424 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 DSC1Q08554 894 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 DBPQ10586 325 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 BAK1Q16611 211 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 DEFB115Q30KQ5 88 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 UNC50Q53HI1 259 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 ZMAT1Q5H9K5 638 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 ARMCX4Q5H9R4 360 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 ZNF678Q5SXM1 525 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 RBM20Q5T481 1227 aaKnown RBP13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 NLRP8Q86W28 1048 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 LIX1LQ8IVB5 337 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 TCTE3Q8IZS6 198 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 ST13P5Q8NFI4 369 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms