RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ATXN7O15265 892 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 PIP5K1CO60331 668 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 CCNT2O60583 730 aaKnown RBP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 RNGTTO60942 597 aaKnown RBP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 PEX11AO75192 247 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 PCDH8O95206 1070 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 PCCBP05166 539 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 HOXC4P09017 264 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 EPXP11678 715 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 HGFP14210 728 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 LBPP18428 481 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 CD22P20273 847 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 CYP2A7P20853 494 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 COL8A1P27658 744 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 IMPA1P29218 277 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 HNRNPH1P31943 449 aaKnown RBP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 PGM1P36871 562 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 DPP6P42658 865 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 MAPK9P45984 424 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 BDKRB1P46663 353 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 PIK3CGP48736 1102 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 CLK1P49759 484 aaKnown RBP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 MNAT1P51948 309 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 CCNG1P51959 295 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 DIO3P55073 304 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 PPP2CBP62714 309 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 RPS21P63220 83 aaKnown RBP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 PPP2CAP67775 309 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 DMPKQ09013 629 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 GRSF1Q12849 480 aaKnown RBP eCLIP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 GRIK2Q13002 908 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 RPA4Q13156 261 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 FZD5Q13467 585 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 CYLC2Q14093 348 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 LRP8Q14114 963 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 NFE2L1Q14494 772 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 INPP5AQ14642 412 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 STARD3Q14849 445 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 ABRAXAS2Q15018 415 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 GSTA3Q16772 222 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 GFOD2Q3B7J2 385 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 SLC44A4Q53GD3 710 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 ARSJQ5FYB0 599 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 C6orf136Q5SQH8 315 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 KIAA1161Q6NSJ0 714 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 PAOXQ6QHF9 649 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 SCIMPQ6UWF3 145 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 GK5Q6ZS86 529 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 USP30Q70CQ3 517 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 TRMT11Q7Z4G4 463 aaKnown RBP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 MILR1Q7Z6M3 343 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 HORMAD1Q86X24 394 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 CFAP206Q8IYR0 622 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 ULK2Q8IYT8 1036 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 DSELQ8IZU8 1212 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 SNX31Q8N9S9 440 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 OR9I1Q8NGQ6 314 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 METTL6Q8TCB7 284 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 MCOLN3Q8TDD5 553 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 THAP3Q8WTV1 239 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 WDR60Q8WVS4 1066 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 TMEM159Q96B96 161 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 RCN3Q96D15 328 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 MSANTD3Q96H12 275 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 SLC45A3Q96JT2 553 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 CLPTM1LQ96KA5 538 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 MRGPRX1Q96LB2 322 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 TEX37Q96LM6 180 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 CCDC138Q96M89 665 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 OR4K3Q96R72 315 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 EGFL8Q99944 293 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 TRIM54Q9BYV2 358 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 OSBPL6Q9BZF3 934 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 RASSF4Q9H2L5 321 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 DPEP2Q9H4A9 486 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 ACTL8Q9H568 366 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 PREBQ9HCU5 417 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 CD93Q9NPY3 652 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 TM7SF3Q9NS93 570 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 MRGBPQ9NV56 204 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 INTS7Q9NVH2 962 aaKnown RBP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 SLC7A8Q9UHI5 535 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 MMP17Q9ULZ9 603 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 SLC17A4Q9Y2C5 497 aa6.34□□□□□ -1.39
CAPN3-210ENST00000561817 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.34□□□□□ -1.39
CAPN3-210ENST00000561817 A0A1W2PNR3 127 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 ASPDHA6ND91 283 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 GPR89AB7ZAQ6 455 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 CDK2AP1O14519 115 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 GNB5O14775 395 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 PDPK1O15530 556 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 KATNA1O75449 491 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 SORBS2O94875 1100 aaKnown RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 CLDN9O95484 217 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 SLC16A8O95907 504 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 PAK4O96013 591 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 IGLV3-19P01714 112 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 CATP04040 527 aaKnown RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 DNTTP04053 509 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 CEACAM5P06731 702 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms