RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 MENTQ9BUN1 341 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 MYLK2Q9H1R3 596 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 EHD1Q9H4M9 534 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 TNFRSF12AQ9NP84 129 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 TAAR2Q9P1P5 351 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 SPASTQ9UBP0 616 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 KLF15Q9UIH9 416 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 ZFP69BQ9UJL9 534 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 SNX6Q9UNH7 406 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 DYRK1BQ9Y463 629 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 CFAP20Q9Y6A4 193 aaKnown RBP8.34□□□□□ -1.07
TRAF3-209ENST00000560463 SLCO1B1Q9Y6L6 691 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 ASXL3Q9C0F0 2248 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 A0A1B0GTL3 188 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 FAM221BA6H8Z2 402 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 KRT87PA6NCN2 255 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 OR52A4PA6NMU1 304 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 H0YIV9 168 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 SLC28A1O00337 649 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 SLC22A2O15244 555 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 ULK1O75385 1050 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 ATP5HO75947 161 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 KIAA0754O94854 1291 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 JUNP05412 331 aaKnown RBP8.33□□□□□ -1.08
TRAF3-209ENST00000560463 PCSK2P16519 638 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 EPORP19235 508 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 CXCR2P25025 360 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 EPHA3P29320 983 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 ADSLP30566 484 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-209ENST00000560463 PKLRP30613 574 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 SHMT2P34897 504 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 SLC19A1P41440 591 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 DHPSP49366 369 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-209ENST00000560463 CSNK1EP49674 416 aaKnown RBP8.33□□□□□ -1.08
TRAF3-209ENST00000560463 IRF8Q02556 426 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 HIST2H2ACQ16777 129 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-209ENST00000560463 SMU1Q2TAY7 513 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 LSM12Q3MHD2 195 aaKnown RBP8.33□□□□□ -1.08
TRAF3-209ENST00000560463 PLK5Q496M5 336 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 XKR7Q5GH72 579 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 XKR6Q5GH73 641 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 PRAMEF14Q5SWL7 426 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 THEMIS2Q5TEJ8 643 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 VWA5B1Q5TIE3 1220 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 PRAMEF13Q5VWM6 474 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 PEAR1Q5VY43 1037 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-209ENST00000560463 ATG9BQ674R7 924 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 HIST2H2AA3Q6FI13 130 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 GRHL2Q6ISB3 625 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 LARP4Q71RC2 724 aaKnown RBP eCLIP8.33□□□□□ -1.08
TRAF3-209ENST00000560463 CLNKQ7Z7G1 428 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 TRIM48Q8IWZ4 208 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 DDIASQ8IXT1 998 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 PPFIBP2Q8ND30 876 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 OR52E1Q8NGJ3 308 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 CCL4L1Q8NHW4 92 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 SLC22A18Q96BI1 424 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 REPS1Q96D71 796 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 PTCD3Q96EY7 689 aaKnown RBP8.33□□□□□ -1.08
TRAF3-209ENST00000560463 CDK15Q96Q40 435 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 OR4K3Q96R72 315 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 OR52B2Q96RD2 323 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 KCNA7Q96RP8 456 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 EFCAB11Q9BUY7 163 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 LRRC61Q9BV99 259 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 PITHD1Q9GZP4 211 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-209ENST00000560463 TCEAL2Q9H3H9 227 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-209ENST00000560463 PELI2Q9HAT8 420 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 SLC40A1Q9NP59 571 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 SAR1AQ9NR31 198 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 ABCF3Q9NUQ8 709 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 POT1Q9NUX5 634 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 RIC8BQ9NVN3 520 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 ZSCAN32Q9NX65 697 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 OR6C2Q9NZP2 312 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 SCHIP1Q9P0W5 487 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-209ENST00000560463 ZNF624Q9P2J8 865 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-209ENST00000560463 PILRBQ9UKJ0 227 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 RNF11Q9Y3C5 154 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 TIMM22Q9Y584 194 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 PCDHGA11Q9Y5H2 935 aa8.33□□□□□ -1.08
TRAF3-209ENST00000560463 ERICH4A6NGS2 130 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 E7EQ34 232 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 LMO7DNF2Z398 122 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 FCHO1O14526 889 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 PIP5K1BO14986 540 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 SCAMP1O15126 338 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 AQP9O43315 295 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 RGS14O43566 566 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 DFNA5O60443 496 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 HNRNPCL1O60812 293 aaKnown RBP8.32□□□□□ -1.08
TRAF3-209ENST00000560463 CCNDBP1O95273 360 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 EML2O95834 649 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 VIPP01282 170 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 C1GALT1C1LP0DN25 315 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 HSD3B1P14060 373 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 LBPP18428 481 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 NCF2P19878 526 aaPredicted RBP8.32□□□□□ -1.08
TRAF3-209ENST00000560463 HRH2P25021 359 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 HSD3B2P26439 372 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms