RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 LMNTD1Q8N9Z9 388 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 TTC29Q8NA56 475 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 LINC01555Q8NAE3 123 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 PHF10Q8WUB8 498 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 TFB1MQ8WVM0 346 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 NRGNQ92686 78 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 SELENOSQ9BQE4 189 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 FICDQ9BVA6 458 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 FSD1LQ9BXM9 530 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 TSPAN10Q9H1Z9 355 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 CXXC4Q9H2H0 198 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 ZNF304Q9HCX3 659 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 UVRAGQ9P2Y5 699 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 IGLV3-12A0A075B6K2 115 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 TRBV5-4A0A0C4DH59 114 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 BHMG1C9JSJ3 638 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 FAM227AF5H4B4 570 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 ADAM10O14672 748 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 LIN7AO14910 233 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 ZRANB2O95218 330 aaKnown RBP eCLIP12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 AP2A1O95782 977 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 UQCRHP07919 91 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 GSTM1P09488 218 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 PRSS56P0CW18 603 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 MYBL2P10244 700 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 PECAM1P16284 738 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 KLK2P20151 261 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 ACRV1P26436 265 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 PKLRP30613 574 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 ZNF140P52738 457 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 GSTM4Q03013 218 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 OLIG2Q13516 323 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 KRTCAP3Q53RY4 240 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 ZNF766Q5HY98 468 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 ZC3H12BQ5HYM0 836 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 FIGLAQ6QHK4 219 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 SERPINA9Q86WD7 417 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 C2orf73Q8N5S3 287 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 OR8K1Q8NGG5 319 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 AGAP11Q8TF27 550 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 CA5BP1Q8WTZ4 195 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 RNF25Q96BH1 459 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 SDCCAG3Q96C92 435 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 MRFAP1L1Q96HT8 127 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 DMRTA2Q96SC8 542 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 FOXC2Q99958 501 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 GORASP1Q9BQQ3 440 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 MENTQ9BUN1 341 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 TRIM5Q9C035 493 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 LUC7LQ9NQ29 371 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 SPTLC3Q9NUV7 552 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 RIC8BQ9NVN3 520 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 STMN3Q9NZ72 180 aa12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 BZW2Q9Y6E2 419 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-213ENST00000560127 HYKKA2RU49 373 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 IDSB3KWA1 339 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 NPIPA5E9PKD4 350 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 CTSVO60911 334 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 MC4RP32245 332 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 NR2C2P49116 596 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 EMP2P54851 167 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 VSX2P58304 361 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 MESDQ14696 234 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 BRD3Q15059 726 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 SLC18A3Q16572 532 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 GPR33Q49SQ1 333 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 WASHC2DQ5SRD0 308 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 ABHD17BQ5VST6 288 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 RANBP10Q6VN20 620 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 NAPRTQ6XQN6 538 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 C3P1Q6ZMU1 363 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 NEK10Q6ZWH5 1172 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 DOLPP1Q86YN1 238 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 CHERPQ8IWX8 916 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 APOL2Q9BQE5 337 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 NPDC1Q9NQX5 325 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 STOX2Q9P2F5 926 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 RSPH14Q9UHP6 348 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 NPIPA1Q9UND3 350 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 PRSS21Q9Y6M0 314 aa12.18□□□□□ -0.46
RABGGTA-213ENST00000560127 LOC102723996A0A087X1L8 192 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 SLC5A10A0PJK1 596 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 TMEM200CA6NKL6 621 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 E9PLN8 166 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 FFAR3O14843 346 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 GPR42O15529 346 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 KRT1P04264 644 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 CXCR2P25025 360 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 ADRA1AP35348 466 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 ARHGAP25P42331 645 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 ALDH6A1Q02252 535 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 ZNF33BQ06732 778 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 PCOLCEQ15113 449 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 FRMPD2BQ6IN97 320 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 PRMT9Q6P2P2 845 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 MFSD7Q6UXD7 560 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 BZW1Q7L1Q6 419 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 TAX1BP1Q86VP1 789 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 SIAH3Q8IW03 269 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms