RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 SETD4Q9NVD3 440 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 PRMT7Q9NVM4 692 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 BEX4Q9NWD9 120 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 PARPBPQ9NWS1 579 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 TAS2R1Q9NYW7 299 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 GRHL1Q9NZI5 618 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 KCND2Q9NZV8 630 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 SRRDQ9UH36 339 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 IL20RAQ9UHF4 553 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 ENOPH1Q9UHY7 261 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 SARDHQ9UL12 918 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CDC14AQ9UNH5 594 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 MYRFQ9Y2G1 1151 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZNF281Q9Y2X9 895 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 KLF2Q9Y5W3 355 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 LIPGQ9Y5X9 500 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 XDHP47989 1333 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 RTL9Q8NET4 1388 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 A0A1B0GUH1 482 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 A0A1W2PQ27 194 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 A0A1W2PQ64 194 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 A0A1W2PQC6 194 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 A0A1W2PQD8 194 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 TCRBV5S4A2TA0A5A2 114 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 VPS37CA5D8V6 355 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR5K3A6NET4 321 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 A8MZ25 164 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 E9PAM4 449 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 H7C1Q1 480 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 K7ESM1 405 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 STX16O14662 325 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 STX7O15400 261 aaKnown RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 DNPH1O43598 174 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 HBP1O60381 514 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 VPS26AO75436 327 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 STX11O75558 287 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 GPX5O75715 221 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 APOL3O95236 402 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 PIGRP01833 764 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SRPRAP08240 638 aaKnown RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SYPP08247 313 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 CYP21A2P08686 494 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ANXA4P09525 319 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 OTX1P32242 354 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 PCK1P35558 622 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 GRK3P35626 688 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ACTR1BP42025 376 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC1A2P43004 574 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ETV4P43268 484 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 CDC34P49427 236 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 FLT3LGP49771 235 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 RAB9AP51151 201 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 HNRNPFP52597 415 aaKnown RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 BCAT1P54687 386 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SESN2P58004 480 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 TNNC1P63316 161 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 NOMO3P69849 1222 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZNF200P98182 395 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ACSM1Q08AH1 577 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 EFEMP1Q12805 493 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 MALLQ13021 153 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SPP2Q13103 211 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 MTAPQ13126 283 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 PPIGQ13427 754 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 BFSP2Q13515 415 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ATP1A4Q13733 1029 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 RCAN2Q14206 197 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 MFSD13AQ14CX5 517 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 MED22Q15528 200 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 KLHL12Q53G59 568 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 NOMO2Q5JPE7 1267 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 DDI2Q5TDH0 399 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SEL1L2Q5TEA6 688 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 LCN1P1Q5VSP4 162 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 METTL21CQ5VZV1 264 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 CPZQ66K79 652 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 RAP1GAP2Q684P5 730 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 WBP2NLQ6ICG8 309 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 PLEKHA7Q6IQ23 1121 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 MRNIPQ6NTE8 343 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 KIAA0408Q6ZU52 694 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 PARS2Q7L3T8 475 aaKnown RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 NDUFAF7Q7L592 441 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 HDDC2Q7Z4H3 204 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 GDF7Q7Z4P5 450 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SNX20Q7Z614 316 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 YRDCQ86U90 279 aaKnown RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ECHDC2Q86YB7 292 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 NRROSQ86YC3 692 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 CCDC28AQ8IWP9 274 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 PDIK1LQ8N165 341 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 LINC00116Q8NCU8 138 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 TSPAN14Q8NG11 270 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR4C15Q8NGM1 316 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 RP9Q8TA86 221 aaKnown RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 RNASE11Q8TAA1 199 aaKnown RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 GPX8Q8TED1 209 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SELENOMQ8WWX9 145 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 HTR3CQ8WXA8 447 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 CFHR4Q92496 578 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms