RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ANKRD61A6NGH8 418 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 LILRA5A6NI73 299 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 C4orf47A7E2U8 309 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 PLOD2O00469 737 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CYR61O00622 381 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 SOCS2O14508 198 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 DVL1O14640 695 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CPLX1O14810 134 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CAPN9O14815 690 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 GMNNO75496 209 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 GUCA1CO95843 209 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 MOCS2O96007 188 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 MT-ATP6P00846 226 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CRYABP02511 175 aaKnown RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 SERPING1P05155 500 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ALPPP05187 535 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 SP9P0CG40 484 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ALPPL2P10696 532 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 HSPA8P11142 646 aaKnown RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 EPCAMP16422 314 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 TNFRSF1BP20333 461 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CBLP22681 906 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CD38P28907 300 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 EPHA2P29317 976 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 AHRP35869 848 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ACVRL1P37023 503 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CD86P42081 329 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 MAGEB1P43366 347 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 GMPSP49915 693 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ADARP55265 1226 aaKnown RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CDH11P55287 796 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 EEF1A2Q05639 463 aaKnown RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CACNG1Q06432 222 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 SLC20A2Q08357 652 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ZNF415Q09FC8 603 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 RASGEF1BQ0VAM2 473 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 PNRC1Q12796 327 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ZNF155Q12901 538 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 PPP1R8Q12972 351 aaKnown RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 LCP2Q13094 533 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 KLF9Q13886 244 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 NPTX1Q15818 432 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ACKR1Q16570 336 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CA9Q16790 459 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 PHKG1Q16816 387 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ODF4Q2M2E3 257 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CCDC40Q4G0X9 1142 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 PHLDA2Q53GA4 152 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 FUT10Q6P4F1 479 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CTR9Q6PD62 1173 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 OLFM4Q6UX06 510 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 PLXDC2Q6UX71 529 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ISLR2Q6UXK2 745 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ASB18Q6ZVZ8 466 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ADCK1Q86TW2 530 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 TMEM139Q8IV31 216 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 GPALPP1Q8IXQ4 340 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 LMNTD2Q8IXW0 634 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 MMD2Q8IY49 270 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 APCDD1Q8J025 514 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 C1orf87Q8N0U7 546 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 HDDC3Q8N4P3 179 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CPSF7Q8N684 471 aaKnown RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 TEX9Q8N6V9 391 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 SMRP1Q8NCR6 262 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CCNYQ8ND76 341 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 OR11H4Q8NGC9 324 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 OR13J1Q8NGT2 312 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CCDC110Q8TBZ0 833 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 URGCPQ8TCY9 931 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 FAM216AQ8WUB2 273 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 SLC13A3Q8WWT9 602 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 IRGQQ8WZA9 623 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 BCL2L2Q92843 193 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 RPL36ALQ969Q0 106 aaKnown RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 TSACCQ96A04 125 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 DHX58Q96C10 678 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 SCMH1Q96GD3 660 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ABHD8Q96I13 439 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 FAM71F1Q96KD3 344 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 C16orf45Q96MC5 204 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 SPATA13Q96N96 652 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 FAM111AQ96PZ2 611 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 MYADMQ96S97 322 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 NAP1L3Q99457 506 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 POLR3CQ9BUI4 534 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 TEX13AQ9BXU3 409 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 SEZ6LQ9BYH1 1024 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 NACAP1Q9BZK3 213 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 VN1R1Q9GZP7 353 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 DDX47Q9H0S4 455 aaKnown RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 P2RY12Q9H244 342 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 RIMS4Q9H426 269 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 RNF121Q9H920 327 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 UBTD1Q9HAC8 227 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 SYTL2Q9HCH5 934 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 INTS10Q9NVR2 710 aaKnown RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 CYP39A1Q9NYL5 469 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms