RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 VPS35Q96QK1 796 aa4.95□□□□□ -1.62
HMG20A-204ENST00000558288 ATOH8Q96SQ7 321 aa4.95□□□□□ -1.62
HMG20A-204ENST00000558288 SLC30A2Q9BRI3 323 aa4.95□□□□□ -1.62
HMG20A-204ENST00000558288 NUSAP1Q9BXS6 441 aaKnown RBP4.95□□□□□ -1.62
HMG20A-204ENST00000558288 DPY30Q9C005 99 aa4.95□□□□□ -1.62
HMG20A-204ENST00000558288 NXF3Q9H4D5 531 aaKnown RBP4.95□□□□□ -1.62
HMG20A-204ENST00000558288 TFB2MQ9H5Q4 396 aaKnown RBP4.95□□□□□ -1.62
HMG20A-204ENST00000558288 PRM3Q9NNZ6 103 aa4.95□□□□□ -1.62
HMG20A-204ENST00000558288 ERAP1Q9NZ08 941 aa4.95□□□□□ -1.62
HMG20A-204ENST00000558288 COQ3Q9NZJ6 369 aa4.95□□□□□ -1.62
HMG20A-204ENST00000558288 MAT2BQ9NZL9 334 aa4.95□□□□□ -1.62
HMG20A-204ENST00000558288 MPP6Q9NZW5 540 aa4.95□□□□□ -1.62
HMG20A-204ENST00000558288 TIMM13Q9Y5L4 95 aaPredicted RBP4.95□□□□□ -1.62
HMG20A-204ENST00000558288 COL11A1P12107 1806 aaPredicted RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 CCDC182A6NF36 153 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 TSPAN3O60637 253 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 VIPP01282 170 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 CSF2P04141 144 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 SERPINF2P08697 491 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 ZNF286BP0CG31 522 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 IL7P13232 177 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 CYP2A7P20853 494 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 UGT2B10P36537 528 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 THPOP40225 353 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 IDH2P48735 452 aaKnown RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 HTR6P50406 440 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 SCNN1GP51170 649 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 ZNF135P52742 658 aaPredicted RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 SNRPD2P62316 118 aaKnown RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 ELP6Q0PNE2 266 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 GBX1Q14549 363 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 NFE2Q16621 373 aaPredicted RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 FAM187BQ17R55 369 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 CARD16Q5EG05 197 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 KIAA1614Q5VZ46 1190 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 WSCD1Q658N2 575 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 TIGD7Q6NT04 549 aaPredicted RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 GALNT10Q86SR1 603 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 TAC4Q86UU9 113 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 DPP10Q8N608 796 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 KIAA1958Q8N8K9 716 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 ST13P5Q8NFI4 369 aaPredicted RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 ZNF675Q8TD23 568 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 RHBDF1Q96CC6 855 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 RMDN1Q96DB5 314 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 PYURFQ96I23 114 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 CYP2S1Q96SQ9 504 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 MKRN2Q9H000 416 aaKnown RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 MFSD1Q9H3U5 465 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 RUBCNLQ9H714 662 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 SYTL2Q9HCH5 934 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 TM9SF3Q9HD45 589 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 NDFIP2Q9NV92 336 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 IKZF3Q9UKT9 509 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 UBQLN1Q9UMX0 589 aaKnown RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 ABCG2Q9UNQ0 655 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 ARL5AQ9Y689 179 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 RIF1Q5UIP0 2472 aaKnown RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 MN1Q10571 1320 aaPredicted RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 ZDBF2Q9HCK1 2354 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 EFCAB10A6NFE3 127 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 H3BQ06 376 aaPredicted RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 FFAR3O14843 346 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 GPR42O15529 346 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 NOS1APO75052 506 aaPredicted RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 TMCC2O75069 709 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 ADAMTS4O75173 837 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 SEMA3DO95025 777 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 PAPSS2O95340 614 aaPredicted RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 PRR35P0CG20 571 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 UBL4AP11441 157 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 ACVR2AP27037 513 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 GRK5P34947 590 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 OR3A3P47888 321 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 RPL34P49207 117 aaKnown RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 CXCR4P61073 352 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 RPP38P78345 283 aaKnown RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 KEAP1Q14145 624 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 MED22Q15528 200 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 FXNQ16595 210 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 SV2CQ496J9 727 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 RFTN2Q52LD8 501 aaPredicted RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 XKR7Q5GH72 579 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 SPANXN4Q5MJ08 99 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 KIAA0319Q5VV43 1072 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 CPZQ66K79 652 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 CAPN13Q6MZZ7 669 aaPredicted RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 SHQ1Q6PI26 577 aaKnown RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 Q6ZPB1 254 aaPredicted RBP4.94□□□□□ -1.62
HMG20A-204ENST00000558288 ANKRD46Q86W74 232 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 ARHGAP12Q8IWW6 846 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 FAM109AQ8N4B1 249 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 RHEBL1Q8TAI7 183 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 FCGR1BQ92637 280 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 GTF2H4Q92759 462 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 DNASE1L2Q92874 299 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 MYDGFQ969H8 173 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 KIAA1191Q96A73 305 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 CCDC115Q96NT0 180 aa4.94□□□□□ -1.62
HMG20A-204ENST00000558288 PPP1R2P1Q96PQ5 205 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms