RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 LOC102723996A0A087X1L8 192 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 ANKUB1A6NFN9 424 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 ERI2A8K979 691 aaKnown RBP4.35□□□□□ -1.71
GPHN-215ENST00000557654 MED24O75448 989 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 PRKRAO75569 313 aaKnown RBP4.35□□□□□ -1.71
GPHN-215ENST00000557654 ZFAND5O76080 213 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 GPIP06744 558 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 MX1P20591 662 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 U2AF2P26368 475 aaKnown RBP eCLIP4.35□□□□□ -1.712e-7■■■■□ 19.3
GPHN-215ENST00000557654 SLC6A12P48065 614 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 NCBP1Q09161 790 aaKnown RBP4.35□□□□□ -1.71
GPHN-215ENST00000557654 CHAF1BQ13112 559 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 WTAPQ15007 396 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 KRT79Q5XKE5 535 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 DHRS7BQ6IAN0 325 aaPredicted RBP4.35□□□□□ -1.71
GPHN-215ENST00000557654 TMEM211Q6ICI0 200 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 TMEM139Q8IV31 216 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 RPAP2Q8IXW5 612 aaPredicted RBP4.35□□□□□ -1.71
GPHN-215ENST00000557654 ZNF611Q8N823 705 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 MOSPD2Q8NHP6 518 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 MRGPRDQ8TDS7 321 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 PTPMT1Q8WUK0 201 aaPredicted RBP4.35□□□□□ -1.71
GPHN-215ENST00000557654 IRGQQ8WZA9 623 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 NSUN4Q96CB9 384 aaKnown RBP4.35□□□□□ -1.71
GPHN-215ENST00000557654 CALML4Q96GE6 196 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 NEK1Q96PY6 1258 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 BTBD10Q9BSF8 475 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 OSGEPL1Q9H4B0 414 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 BARHL2Q9NY43 387 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 FLRT3Q9NZU0 649 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 ZDHHC2Q9UIJ5 367 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 RPAP1Q9BWH6 1393 aaPredicted RBP4.35□□□□□ -1.71
GPHN-215ENST00000557654 RGS12O14924 1447 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 ZFYVE9O95405 1425 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 ADGRB3O60242 1522 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 ABCA9Q8IUA7 1624 aa4.35□□□□□ -1.71
GPHN-215ENST00000557654 A8MV72 311 aaPredicted RBP4.34□□□□□ -1.71
GPHN-215ENST00000557654 ARHGEF9O43307 516 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 WDPCPO95876 746 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 ZNF853P0CG23 659 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 PORP16435 677 aaPredicted RBP4.34□□□□□ -1.71
GPHN-215ENST00000557654 GJA1P17302 382 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 PDX1P52945 283 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 CDH13P55290 713 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 UBE2HP62256 183 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 GRAPQ13588 217 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 PAPD5Q8NDF8 572 aaKnown RBP4.34□□□□□ -1.71
GPHN-215ENST00000557654 ZNF397Q8NF99 534 aaPredicted RBP4.34□□□□□ -1.71
GPHN-215ENST00000557654 KIF18AQ8NI77 898 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 SLC22A18Q96BI1 424 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 LINC00479Q96M42 142 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 FNBP1Q96RU3 617 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 ZNF701Q9NV72 531 aaPredicted RBP4.34□□□□□ -1.71
GPHN-215ENST00000557654 B3GAT1Q9P2W7 334 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 CACNG4Q9UBN1 327 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 DAPK2Q9UIK4 370 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 GPR34Q9UPC5 381 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 WBP11Q9Y2W2 641 aaKnown RBP4.34□□□□□ -1.71
GPHN-215ENST00000557654 RPGRIP1LQ68CZ1 1315 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 CPSF1Q10570 1443 aaKnown RBP4.34□□□□□ -1.71
GPHN-215ENST00000557654 ATP10DQ9P241 1426 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 ZFYVE16Q7Z3T8 1539 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 QRICH2Q9H0J4 1663 aa4.34□□□□□ -1.71
GPHN-215ENST00000557654 ANKRD26Q9UPS8 1709 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 ZCCHC11Q5TAX3 1644 aaKnown RBP4.33□□□□□ -1.72
GPHN-215ENST00000557654 GLI2P10070 1586 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 EFCAB6Q5THR3 1501 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 TULP4Q9NRJ4 1543 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 GPR75-ASB3A0A0A6YYF3 556 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 A0A1W2PN81 502 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 SORBS2O94875 1100 aaKnown RBP4.33□□□□□ -1.72
GPHN-215ENST00000557654 CEBPBP17676 345 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 ALOX12P18054 663 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 PTPN3P26045 913 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 CHRNA7P36544 502 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 MAGEA11P43364 429 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 PRKCZQ05513 592 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 SQLEQ14534 574 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 LPAL2Q16609 132 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 ITPRIPL2Q3MIP1 535 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 RILPL1Q5EBL4 403 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 XKR6Q5GH73 641 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 XKR3Q5GH77 459 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 SPDYCQ5MJ68 293 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 TMEM173Q86WV6 379 aaPredicted RBP4.33□□□□□ -1.72
GPHN-215ENST00000557654 ZNF595Q8IYB9 648 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 KRT222Q8N1A0 295 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 OR11H4Q8NGC9 324 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 LPGAT1Q92604 370 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 ZNF689Q96CS4 500 aaPredicted RBP4.33□□□□□ -1.72
GPHN-215ENST00000557654 ATOH8Q96SQ7 321 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 NUP85Q9BW27 656 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 CDK19Q9BWU1 502 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 MMP27Q9H306 513 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 PDE7BQ9NP56 450 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 RNF186Q9NXI6 227 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 PSD3Q9NYI0 1048 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 PYCARDQ9ULZ3 195 aa4.33□□□□□ -1.72
GPHN-215ENST00000557654 EXOGQ9Y2C4 368 aaKnown RBP4.33□□□□□ -1.72
GPHN-215ENST00000557654 GRIP1Q9Y3R0 1128 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms