RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 DCSTAMPQ9H295 470 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 LATS2Q9NRM7 1088 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 AASDHPPTQ9NRN7 309 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 FBXO10Q9UK96 956 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 SNX6Q9UNH7 406 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 ARVCFO00192 962 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 EIF3FO00303 357 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-231ENST00000557433 RFXANKO14593 260 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 AXIN1O15169 862 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 ZNF682O95780 498 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 PTPN2P17706 415 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 CLK1P49759 484 aaKnown RBP15.85■□□□□ 0.13
SHMT2-231ENST00000557433 ITGA1P56199 1179 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 LSM3P62310 102 aaKnown RBP15.85■□□□□ 0.13
SHMT2-231ENST00000557433 NKX3-2P78367 333 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 CD300CQ08708 224 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 BOP1Q14137 746 aaKnown RBP15.85■□□□□ 0.13
SHMT2-231ENST00000557433 KCNJ8Q15842 424 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 VMACQ2NL98 169 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 PGS1Q32NB8 556 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 FBXO43Q4G163 708 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 INO80DQ53TQ3 878 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-231ENST00000557433 C1QTNF12Q5T7M4 302 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 CEP68Q76N32 757 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 EIF3MQ7L2H7 374 aaKnown RBP15.85■□□□□ 0.13
SHMT2-231ENST00000557433 SERPINA9Q86WD7 417 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 LYSMD2Q8IV50 215 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 NAT16Q8N8M0 369 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 MYDGFQ969H8 173 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 YME1L1Q96TA2 773 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 TTLL2Q9BWV7 592 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 CCSER2Q9H7U1 834 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 REEP1Q9H902 201 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 SLC6A13Q9NSD5 602 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 CCDC59Q9P031 241 aaKnown RBP15.85■□□□□ 0.13
SHMT2-231ENST00000557433 PDP1Q9P0J1 537 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-231ENST00000557433 CPA4Q9UI42 421 aa15.85■□□□□ 0.13
SHMT2-231ENST00000557433 METTL15A6NJ78 407 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 CBX4O00257 560 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 NUAK1O60285 661 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 ANXA5P08758 320 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 MYCLP1P12525 358 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-231ENST00000557433 KRT20P35900 424 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 OR1G1P47890 313 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 PXNP49023 591 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-231ENST00000557433 ZNF33BQ06732 778 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 MTAPQ13126 283 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 DGCR6Q14129 220 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 GPRC6AQ5T6X5 926 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 LRRC70Q7Z2Q7 622 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 ZNF280BQ86YH2 543 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 KBTBD8Q8NFY9 601 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 EPYCQ99645 322 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 GABARAPL3Q9BY60 117 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 ACPTQ9BZG2 426 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 NXF2Q9GZY0 626 aaKnown RBP15.84■□□□□ 0.13
SHMT2-231ENST00000557433 SLC32A1Q9H598 525 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 FARSBQ9NSD9 589 aaKnown RBP15.84■□□□□ 0.13
SHMT2-231ENST00000557433 ABCG2Q9UNQ0 655 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 ZNF232Q9UNY5 417 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 SAMHD1Q9Y3Z3 626 aaKnown RBP15.84■□□□□ 0.13
SHMT2-231ENST00000557433 TRBV5-4A0A0C4DH59 114 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 PABPN1LA6NDY0 278 aaKnown RBP15.84■□□□□ 0.13
SHMT2-231ENST00000557433 AGAP5A6NIR3 686 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 MYO1GB0I1T2 1018 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 MAN1A2O60476 641 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 SLC25A14O95258 325 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-231ENST00000557433 C9P02748 559 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 GPX2P18283 190 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 FSHRP23945 695 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 ALDH4A1P30038 563 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 HOXA9P31269 272 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 KDELR2P33947 212 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 GGT5P36269 586 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 PRKCDQ05655 676 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 NPRL3Q12980 569 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 SELENBP1Q13228 472 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 GPR17Q13304 367 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 VEZF1Q14119 521 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 DUOXA1Q1HG43 343 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 PNCKQ6P2M8 343 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 DOK6Q6PKX4 331 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 CBLL1Q75N03 491 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 AKAP14Q86UN6 197 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 TTC9BQ8N6N2 239 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 PSMA8Q8TAA3 256 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 GPR152Q8TDT2 470 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 CSGALNACT1Q8TDX6 532 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 OVCA2Q8WZ82 227 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 HRASLS5Q96KN8 279 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 HTATIP2Q9BUP3 242 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 APOL5Q9BWW9 433 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 EHD1Q9H4M9 534 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 TESMINQ9Y4I5 508 aa15.84■□□□□ 0.13
SHMT2-231ENST00000557433 MTMR11A4FU01 709 aa15.83■□□□□ 0.12
SHMT2-231ENST00000557433 AIREO43918 545 aa15.83■□□□□ 0.12
SHMT2-231ENST00000557433 SNX4O95219 450 aa15.83■□□□□ 0.12
SHMT2-231ENST00000557433 PRAMEF1O95521 474 aa15.83■□□□□ 0.12
SHMT2-231ENST00000557433 CYP4B1P13584 511 aa15.83■□□□□ 0.12
SHMT2-231ENST00000557433 CTPS1P17812 591 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms