RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 Q96MF0 132 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 AGPAT1Q99943 283 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 SELENOSQ9BQE4 189 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 ZNF700Q9H0M5 742 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 COG4Q9H9E3 785 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 CBLCQ9ULV8 474 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 TDRKHQ9Y2W6 561 aaKnown RBP11.86□□□□□ -0.51
PSEN1-220ENST00000557037 IGHV3-20A0A0C4DH32 117 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 HYKKA2RU49 373 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 KLHL33A6NCF5 533 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 TRIM64A6NGJ6 449 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 TRIM64BA6NI03 449 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 SEC24DO94855 1032 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-220ENST00000557037 NDST3O95803 873 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 F12P00748 615 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-220ENST00000557037 HEXBP07686 556 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 CD48P09326 243 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 TPBGLP0DKB5 382 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 ICAM2P13598 275 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 ATP1A3P13637 1013 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 CD53P19397 219 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 FBLP22087 321 aaKnown RBP11.85□□□□□ -0.51
PSEN1-220ENST00000557037 RFC3P40938 356 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 VSX2P58304 361 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-220ENST00000557037 ITGA9Q13797 1035 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 PTPRCAPQ14761 206 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 NCBP2-AS2Q69YL0 99 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 SLC25A25Q6KCM7 469 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 CCDC70Q6NSX1 233 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 ACAD11Q709F0 780 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 CRLF3Q8IUI8 442 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 P3H2Q8IVL5 708 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 OR5M3Q8NGP4 307 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 ZNF398Q8TD17 642 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 FATE1Q969F0 183 aa11.85□□□□□ -0.51
PSEN1-220ENST00000557037 LINC00615Q96LM1 132 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-220ENST00000557037 BEX4Q9NWD9 120 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-220ENST00000557037 TFECO14948 347 aaPredicted RBP11.84□□□□□ -0.51
PSEN1-220ENST00000557037 PDE9AO76083 593 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 UQCRC1P31930 480 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 FAM214AQ32MH5 1076 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 EMC4Q5J8M3 183 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 TCTE1Q5JU00 501 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 WASHC2DQ5SRD0 308 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 ZDHHC20Q5W0Z9 365 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 UNC5DQ6UXZ4 953 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 LMNTD1Q8N9Z9 388 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 SPATA22Q8NHS9 363 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 DTX3LQ8TDB6 740 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 IMP4Q96G21 291 aaKnown RBP11.84□□□□□ -0.51
PSEN1-220ENST00000557037 NPAS2Q99743 824 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 SLC6A16Q9GZN6 736 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 PLEKHF2Q9H8W4 249 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 SMOXQ9NWM0 555 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 TRPC4Q9UBN4 977 aa11.84□□□□□ -0.51
PSEN1-220ENST00000557037 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.83□□□□□ -0.51
PSEN1-220ENST00000557037 IGLV3-12A0A075B6K2 115 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 LOC102723996A0A087X1L8 192 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 GABRR3A8MPY1 467 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 NEURL1O76050 574 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 PCK1P35558 622 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 ZFP36L2P47974 494 aaKnown RBP11.83□□□□□ -0.52
PSEN1-220ENST00000557037 CD151P48509 253 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 NR0B1P51843 470 aaKnown RBP11.83□□□□□ -0.52
PSEN1-220ENST00000557037 GBE1Q04446 702 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 PAFAH1B3Q15102 231 aaKnown RBP11.83□□□□□ -0.52
PSEN1-220ENST00000557037 BTBD16Q32M84 506 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 FLYWCH1Q4VC44 716 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 CXorf67Q86X51 503 aaPredicted RBP11.83□□□□□ -0.52
PSEN1-220ENST00000557037 ELOA2Q8IYF1 753 aaPredicted RBP11.83□□□□□ -0.52
PSEN1-220ENST00000557037 C2orf73Q8N5S3 287 aaPredicted RBP11.83□□□□□ -0.52
PSEN1-220ENST00000557037 FAM222BQ8WU58 562 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 TMEM125Q96AQ2 219 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 DCUN1D1Q96GG9 259 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 SRPK1Q96SB4 655 aaKnown RBP11.83□□□□□ -0.52
PSEN1-220ENST00000557037 OLFM1Q99784 485 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 TUBB6Q9BUF5 446 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 BDH2Q9BUT1 245 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 KCNK13Q9HB14 408 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 UBP1Q9NZI7 540 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 OR6C2Q9NZP2 312 aa11.83□□□□□ -0.52
PSEN1-220ENST00000557037 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.83□□□□□ -0.52
PSEN1-220ENST00000557037 TGP01266 2768 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 FITM1A5D6W6 292 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 HS6ST1O60243 411 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 SUN1O94901 812 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 TFEBP19484 476 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 PRLHRP49683 370 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 EFNA3P52797 238 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 SLC10A2Q12908 348 aaPredicted RBP11.82□□□□□ -0.52
PSEN1-220ENST00000557037 KIR2DS3Q14952 304 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 TAZQ16635 292 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 MEP1AQ16819 746 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 ZC3H12BQ5HYM0 836 aaKnown RBP11.82□□□□□ -0.52
PSEN1-220ENST00000557037 PRMT9Q6P2P2 845 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 FIGLAQ6QHK4 219 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 WDR53Q7Z5U6 358 aaPredicted RBP11.82□□□□□ -0.52
PSEN1-220ENST00000557037 TAX1BP1Q86VP1 789 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 SLC25A41Q8N5S1 370 aa11.82□□□□□ -0.52
PSEN1-220ENST00000557037 BLOC1S5Q8TDH9 187 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms