RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 OR56A3Q8NH54 315 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 NEIL2Q969S2 332 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 APOLD1Q96LR9 279 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 PPM1MQ96MI6 270 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 IL17FQ96PD4 163 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 TSSK3Q96PN8 268 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 PAPOLBQ9NRJ5 636 aaKnown RBP17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 ABCD2Q9UBJ2 740 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 SH2B3Q9UQQ2 575 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 ASF1AQ9Y294 204 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 NUMA1Q14980 2115 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 LATO43561 262 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 DNTTP04053 509 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 TACR1P25103 407 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 TBPL1P62380 186 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 ADGRE1Q14246 886 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 PRMT9Q6P2P2 845 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 OR5AR1Q8NGP9 310 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 GFM2Q969S9 779 aaKnown RBP17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 TMEM125Q96AQ2 219 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 EBPLQ9BY08 206 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 ZDHHC5Q9C0B5 715 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 WDR26Q9H7D7 661 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 USP22Q9UPT9 525 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 TDRKHQ9Y2W6 561 aaKnown RBP17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 PCDHA9Q9Y5H5 950 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 PIAS3Q9Y6X2 628 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 DENND4AQ7Z401 1863 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 C17orf113A0A1B0GUU1 675 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 A0A1W2PQF6 199 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 A0A1W2PQU0 124 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 ANHXE9PGG2 379 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 SCAMP1O15126 338 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 LRATO95237 230 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 SGCGQ13326 291 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 SPANXN4Q5MJ08 99 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 LIPJQ5W064 366 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 NANOGP8Q6NSW7 305 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 RNF165Q6ZSG1 346 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 TMPRSS11BQ86T26 416 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 LRRTM4Q86VH4 590 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 TSC22D3Q99576 134 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 ZBTB18Q99592 522 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 NANOGQ9H9S0 305 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 SGK2Q9HBY8 427 aa17.75■□□□□ 0.43
SDR39U1-220ENST00000556548 TBC1D3DA0A087WVF3 549 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 TBC1D3IA0A087WXS9 549 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 TBC1D3EA0A087X179 549 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 TBC1D3KA0A087X1G2 549 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 TBC1D3FA6NER0 549 aaPredicted RBP17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 TBC1D3LB9A6J9 549 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 TBC1D3HP0C7X1 549 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 PCNAP12004 261 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 ACADLP28330 430 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 CATSPEREQ5SY80 951 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 TBC1D3GQ6DHY5 549 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 TBC1D3CQ6IPX1 549 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 CHST15Q7LFX5 561 aaPredicted RBP17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 DHFR2Q86XF0 187 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 TBC1D3Q8IZP1 549 aaPredicted RBP17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 PQLC1Q8N2U9 271 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 OR9A1PQ8NGU1 263 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 EGLN2Q96KS0 407 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 OR52A5Q9H2C5 316 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 CD93Q9NPY3 652 aa17.74■□□□□ 0.43
SDR39U1-220ENST00000556548 FUCA1P04066 466 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 ATP6V1B2P21281 511 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 GRIA3P42263 894 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 RALGPS2Q86X27 583 aaPredicted RBP17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 LILRA2Q8N149 483 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 ZNF184Q99676 751 aaPredicted RBP17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 DPEP2Q9H4A9 486 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 LIMD1Q9UGP4 676 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 MOSPD1Q9UJG1 213 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 CKAP5Q14008 2032 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 C2CD4DB7Z1M9 353 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 SLC31A1O15431 190 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 ATP6V1C1P21283 382 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 MAPK9P45984 424 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 MTPNP58546 118 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 MEF2AQ02078 507 aaPredicted RBP17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 LIPEQ05469 1076 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 TRAP1Q12931 704 aaKnown RBP17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 SELPLGQ14242 412 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 CAPN13Q6MZZ7 669 aaPredicted RBP17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 DLEU7Q6UYE1 221 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 DNAJC14Q6Y2X3 702 aaPredicted RBP17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 SPPL2CQ8IUH8 684 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 TP53I13Q8NBR0 393 aaPredicted RBP17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 WDR20Q8TBZ3 569 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 FAM110BQ8TC76 370 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 LRGUKQ96M69 825 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 GABRG3Q99928 467 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 PKP2Q99959 881 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 KCNE2Q9Y6J6 123 aa17.73■□□□□ 0.43
SDR39U1-220ENST00000556548 ZNF839A8K0R7 811 aa17.72■□□□□ 0.43
SDR39U1-220ENST00000556548 RNGTTO60942 597 aaKnown RBP17.72■□□□□ 0.43
SDR39U1-220ENST00000556548 B3GALT4O96024 378 aa17.72■□□□□ 0.43
SDR39U1-220ENST00000556548 NCK1P16333 377 aa17.72■□□□□ 0.43
SDR39U1-220ENST00000556548 NPPBP16860 134 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms