RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 THAP2Q9H0W7 228 aa3.99□□□□□ -1.77
SCFD1-221ENST00000556534 P2RY12Q9H244 342 aa3.99□□□□□ -1.77
SCFD1-221ENST00000556534 C5AR2Q9P296 337 aa3.99□□□□□ -1.77
SCFD1-221ENST00000556534 WDR83OSQ9Y284 106 aa3.99□□□□□ -1.77
SCFD1-221ENST00000556534 O00370 1275 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 ARPC2O15144 300 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 ARHGEF9O43307 516 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 DARSP14868 501 aaKnown RBP3.98□□□□□ -1.77
SCFD1-221ENST00000556534 CD27P26842 260 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 RPL21P46778 160 aaKnown RBP3.98□□□□□ -1.77
SCFD1-221ENST00000556534 SLC6A12P48065 614 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 ALDH3A2P51648 485 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 LIMK1P53667 647 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 CLDN15P56746 228 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 POLR2LP62875 67 aaKnown RBP3.98□□□□□ -1.77
SCFD1-221ENST00000556534 IRX1P78414 480 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-221ENST00000556534 TNIP1Q15025 636 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 NPTX1Q15818 432 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 CTU2Q2VPK5 515 aaKnown RBP3.98□□□□□ -1.77
SCFD1-221ENST00000556534 SLC35D3Q5M8T2 416 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 TMEM207Q6UWW9 146 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 ZBTB49Q6ZSB9 765 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 IL17RELQ6ZVW7 336 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 DET1Q7L5Y6 550 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 TTC30BQ8N4P2 665 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 RAB42Q8N4Z0 105 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 PI4KAP1Q8N8J0 262 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 OR13C3Q8NGS6 347 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 OR2T6Q8NHC8 308 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 HDAC11Q96DB2 347 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 ERP27Q96DN0 273 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 OTUB1Q96FW1 271 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-221ENST00000556534 FAM71F1Q96KD3 344 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-221ENST00000556534 FUCA2Q9BTY2 467 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 PITPNM3Q9BZ71 974 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 ANKRD2Q9GZV1 360 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 TLE6Q9H808 572 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 TRPV4Q9HBA0 871 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 CDH20Q9HBT6 801 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 TNNQ9UQP3 1299 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 PPP2R2CQ9Y2T4 447 aa3.98□□□□□ -1.77
SCFD1-221ENST00000556534 IGKV3D-15A0A087WSY6 115 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 URADA6NGE7 173 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 CYSRT1A8MQ03 144 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 A8MXE2 369 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 CLDN4O14493 209 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 ZNF195O14628 629 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 GLRA3O75311 464 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 IRF2P14316 349 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 EPCAMP16422 314 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 TYMPP19971 482 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 AZGP1P25311 298 aaKnown RBP3.97□□□□□ -1.77
SCFD1-221ENST00000556534 KRT20P35900 424 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 CCR10P46092 362 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 RAB28P51157 221 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 LUMP51884 338 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-221ENST00000556534 NUCB1Q02818 461 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 PRPF4BQ13523 1007 aaKnown RBP3.97□□□□□ -1.77
SCFD1-221ENST00000556534 VEZF1Q14119 521 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 PHKG1Q16816 387 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 CST9LP1Q5W188 147 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 KRT39Q6A163 491 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 UGT3A1Q6NUS8 523 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 IL27RAQ6UWB1 636 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 BTN2A1Q7KYR7 527 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 OR8H2Q8N162 312 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 NIPA2Q8N8Q9 360 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 SLC4A11Q8NBS3 891 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 DBF4BQ8NFT6 615 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 OR6J1Q8NGC5 347 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 OR1L3Q8NH93 324 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 ROBO4Q8WZ75 1007 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 AZIN2Q96A70 460 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 ZNF599Q96NL3 588 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 BCCIPQ9P287 314 aaKnown RBP eCLIP3.97□□□□□ -1.77
SCFD1-221ENST00000556534 WDR37Q9Y2I8 494 aa3.97□□□□□ -1.77
SCFD1-221ENST00000556534 A0A1B0GU03 582 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 AP5Z1O43299 807 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 PLOD3O60568 738 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 CDK2AP2O75956 126 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 CLDN1O95832 211 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 FYNP06241 537 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 OR52Z1P0C646 297 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 SAGP10523 405 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-221ENST00000556534 GP1BBP13224 206 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 ACHEP22303 614 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 CSTF2P33240 577 aaKnown RBP eCLIP3.96□□□□□ -1.78
SCFD1-221ENST00000556534 LEPRP48357 1165 aaKnown RBP3.96□□□□□ -1.78
SCFD1-221ENST00000556534 VAMP7P51809 220 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 RBPJQ06330 500 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 KLC1Q07866 573 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 TCTE1Q5JU00 501 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 KRBOX4Q5JUW0 171 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 KRT80Q6KB66 452 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 OR4K1Q8NGD4 311 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 VANGL1Q8TAA9 524 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-221ENST00000556534 SPSB1Q96BD6 273 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 MAGED4Q96JG8 741 aa3.96□□□□□ -1.78
SCFD1-221ENST00000556534 POM121L2Q96KW2 1035 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms