RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ESPL1Q14674 2120 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 USP9YO00507 2555 aaPredicted RBP21.64■■□□□ 1.06
ACTN1-220ENST00000556433 SHANK1Q9Y566 2161 aa21.64■■□□□ 1.06
ACTN1-220ENST00000556433 TCP11X1B4DZS4 312 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 H3BMM5 538 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 SRPX2O60687 465 aaPredicted RBP21.64■■□□□ 1.05
ACTN1-220ENST00000556433 CTSVO60911 334 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 NIPSNAP2O75323 286 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 CHRM3P20309 590 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 MMP11P24347 488 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 SOX8P57073 446 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 VSX2P58304 361 aaPredicted RBP21.64■■□□□ 1.05
ACTN1-220ENST00000556433 SARNPP82979 210 aaKnown RBP21.64■■□□□ 1.05
ACTN1-220ENST00000556433 TYSND1Q2T9J0 566 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 WASHC2DQ5SRD0 308 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 RNF187Q5TA31 235 aaPredicted RBP21.64■■□□□ 1.05
ACTN1-220ENST00000556433 IGFL3Q6UXB1 125 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 PRELID2Q8N945 189 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 OR2L3Q8NG85 312 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 HMGCLL1Q8TB92 370 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 NACC2Q96BF6 587 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 C19orf60Q96EN9 201 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 SLC29A3Q9BZD2 475 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 WDR54Q9H977 334 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 B3GNT3Q9Y2A9 372 aa21.64■■□□□ 1.05
ACTN1-220ENST00000556433 FITM1A5D6W6 292 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 AVILO75366 819 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 IPO13O94829 963 aaKnown RBP21.63■■□□□ 1.05
ACTN1-220ENST00000556433 ESR1P03372 595 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 OR1D4P47884 311 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 VPS41P49754 854 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 AIMP2Q13155 320 aaKnown RBP21.63■■□□□ 1.05
ACTN1-220ENST00000556433 COX15Q7KZN9 410 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 IQCKQ8N0W5 287 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 ZADH2Q8N4Q0 377 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 METTL27Q8N6F8 245 aaPredicted RBP21.63■■□□□ 1.05
ACTN1-220ENST00000556433 OR2A1Q8NGT9 310 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 SLC26A1Q9H2B4 701 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 ENAMQ9NRM1 1142 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 IL1RAPL1Q9NZN1 696 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 SPATA7Q9P0W8 599 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 FBXL4Q9UKA2 621 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 FAM169AQ9Y6X4 670 aa21.63■■□□□ 1.05
ACTN1-220ENST00000556433 A0A0J9YVX5 310 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 A0A1W2PPV9 198 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 HYKKA2RU49 373 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 MATN4O95460 622 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 ITGA3P26006 1051 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 GPS1Q13098 491 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 MRPL49Q13405 166 aaKnown RBP21.62■■□□□ 1.05
ACTN1-220ENST00000556433 FASTKQ14296 549 aaKnown RBP21.62■■□□□ 1.05
ACTN1-220ENST00000556433 EIF2S3LQ2VIR3 472 aaKnown RBP21.62■■□□□ 1.05
ACTN1-220ENST00000556433 KIAA0930Q6ICG6 404 aaPredicted RBP21.62■■□□□ 1.05
ACTN1-220ENST00000556433 FRMPD2BQ6IN97 320 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 CASC4Q6P4E1 433 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 SHISA6Q6ZSJ9 500 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 CISD2Q8N5K1 135 aaKnown RBP21.62■■□□□ 1.05
ACTN1-220ENST00000556433 TM9SF4Q92544 642 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 SNRNP40Q96DI7 357 aaKnown RBP21.62■■□□□ 1.05
ACTN1-220ENST00000556433 SPSB2Q99619 263 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 SOX17Q9H6I2 414 aaPredicted RBP21.62■■□□□ 1.05
ACTN1-220ENST00000556433 SLC6A20Q9NP91 592 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 GALPQ9UBC7 116 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 ZC3H7BQ9UGR2 993 aaKnown RBP21.62■■□□□ 1.05
ACTN1-220ENST00000556433 KLK4Q9Y5K2 254 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 MAU2Q9Y6X3 613 aa21.62■■□□□ 1.05
ACTN1-220ENST00000556433 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.61■■□□□ 1.05
ACTN1-220ENST00000556433 LOC105369274A0A096LPK9 316 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 LOC102723532A0A0G2JNH3 316 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 SEMA7AO75326 666 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 PAMP19021 973 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 OGNP20774 298 aaKnown RBP21.61■■□□□ 1.05
ACTN1-220ENST00000556433 ATP5DP30049 168 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 ADARP55265 1226 aaKnown RBP21.61■■□□□ 1.05
ACTN1-220ENST00000556433 YBX1P67809 324 aaKnown RBP21.61■■□□□ 1.05
ACTN1-220ENST00000556433 GBX1Q14549 363 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 KCNJ11Q14654 390 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 ANKRD20A4Q4UJ75 823 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 ACSBG2Q5FVE4 666 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 NEPROQ6NW34 567 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 LRRC8AQ8IWT6 810 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 OR4N4Q8N0Y3 316 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 DTWD1Q8N5C7 304 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 OR9A1PQ8NGU1 263 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 ACAT2Q9BWD1 397 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 ILKAPQ9H0C8 392 aaPredicted RBP21.61■■□□□ 1.05
ACTN1-220ENST00000556433 ZBTB20Q9HC78 741 aaPredicted RBP21.61■■□□□ 1.05
ACTN1-220ENST00000556433 CTSFQ9UBX1 484 aa21.61■■□□□ 1.05
ACTN1-220ENST00000556433 NXT1Q9UKK6 140 aaKnown RBP21.61■■□□□ 1.05
ACTN1-220ENST00000556433 SOCS6O14544 535 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 NRP2O60462 931 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 ALOX12BO75342 701 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 KRT14P02533 472 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 EIF2S1P05198 315 aaKnown RBP21.6■■□□□ 1.05
ACTN1-220ENST00000556433 PKMP14618 531 aaKnown RBP21.6■■□□□ 1.05
ACTN1-220ENST00000556433 CMPK1P30085 196 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 PRAMEF13Q5VWM6 474 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 FBXO42Q6P3S6 717 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 KIRREL2Q6UWL6 708 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 CENPUQ71F23 418 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms