RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 AIMP2Q13155 320 aaKnown RBP20.69■□□□□ 0.9
SDR39U1-216ENST00000556175 CTSL3PQ5NE16 218 aa20.69■□□□□ 0.9
SDR39U1-216ENST00000556175 KIAA0930Q6ICG6 404 aaPredicted RBP20.69■□□□□ 0.9
SDR39U1-216ENST00000556175 CNSTQ6PJW8 725 aa20.69■□□□□ 0.9
SDR39U1-216ENST00000556175 BIRC8Q96P09 236 aa20.69■□□□□ 0.9
SDR39U1-216ENST00000556175 CDC23Q9UJX2 597 aa20.69■□□□□ 0.9
SDR39U1-216ENST00000556175 B3GNT3Q9Y2A9 372 aa20.69■□□□□ 0.9
SDR39U1-216ENST00000556175 NFS1Q9Y697 457 aa20.69■□□□□ 0.9
SDR39U1-216ENST00000556175 OGNP20774 298 aaKnown RBP20.68■□□□□ 0.9
SDR39U1-216ENST00000556175 FMO4P31512 558 aa20.68■□□□□ 0.9
SDR39U1-216ENST00000556175 OR2L3Q8NG85 312 aa20.68■□□□□ 0.9
SDR39U1-216ENST00000556175 MIPEPQ99797 713 aa20.68■□□□□ 0.9
SDR39U1-216ENST00000556175 ILKAPQ9H0C8 392 aaPredicted RBP20.68■□□□□ 0.9
SDR39U1-216ENST00000556175 ZNF552Q9H707 407 aaPredicted RBP20.68■□□□□ 0.9
SDR39U1-216ENST00000556175 SPTBN1Q01082 2364 aaKnown RBP20.68■□□□□ 0.9
SDR39U1-216ENST00000556175 PCM1Q15154 2024 aa20.68■□□□□ 0.9
SDR39U1-216ENST00000556175 SHANK1Q9Y566 2161 aa20.68■□□□□ 0.9
SDR39U1-216ENST00000556175 CCDC88CQ9P219 2028 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 ANKRD12Q6UB98 2062 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 NRDCO43847 1150 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 MATN4O95460 622 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 ITGAXP20702 1163 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 NKG7Q16617 165 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 CCSMST1Q4G0I0 132 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 PRR30Q53SZ7 412 aaPredicted RBP20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 IRAK1BP1Q5VVH5 260 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 CES3Q6UWW8 571 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 ZADH2Q8N4Q0 377 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 SPSB2Q99619 263 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 FAM114A2Q9NRY5 505 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 CUEDC1Q9NWM3 386 aaPredicted RBP20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 SAMD15Q9P1V8 674 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 RUVBL2Q9Y230 463 aaKnown RBP20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 NUP210LQ5VU65 1888 aa20.67■□□□□ 0.9
SDR39U1-216ENST00000556175 TCP11X1B4DZS4 312 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 GOLGA8KD6RF30 607 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 E5RI56 91 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 GOLGA8TH3BQL2 631 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 CTSVO60911 334 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 PHF2O75151 1096 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 NIPSNAP2O75323 286 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 CHRM3P20309 590 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 MCM3P25205 808 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 ITGA3P26006 1051 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 CMPK1P30085 196 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 MAGEA6P43360 314 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 VSX2P58304 361 aaPredicted RBP20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 GBX1Q14549 363 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 KCNJ11Q14654 390 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 ANKRD20A4Q4UJ75 823 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 WASHC2DQ5SRD0 308 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 CASC4Q6P4E1 433 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 RNF44Q7L0R7 432 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 OR2A1Q8NGT9 310 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 SEMA3GQ9NS98 782 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 FBXL4Q9UKA2 621 aa20.66■□□□□ 0.9
SDR39U1-216ENST00000556175 HYKKA2RU49 373 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 ZNF839A8K0R7 811 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 ERVK-10P10266 1014 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 PSMB5P28074 263 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 FOXL2P58012 376 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 GPS1Q13098 491 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 RBBP7Q16576 425 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 PLEKHN1Q494U1 663 aaPredicted RBP20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 PRAMEF13Q5VWM6 474 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 PRMT9Q6P2P2 845 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 COX15Q7KZN9 410 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 PRELID2Q8N945 189 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 OR9A1PQ8NGU1 263 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 SSC4DQ8WTU2 575 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 SLC6A20Q9NP91 592 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 INTS10Q9NVR2 710 aaKnown RBP20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 CRYL1Q9Y2S2 319 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 ESPL1Q14674 2120 aa20.65■□□□□ 0.9
SDR39U1-216ENST00000556175 A0A0J9YVX5 310 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 TCRBV7S3A2A0A539 114 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 MAGEB16A2A368 324 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 VPS26AO75436 327 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 CATP04040 527 aaKnown RBP20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 MLNP12872 115 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 PKMP14618 531 aaKnown RBP20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 CXCR5P32302 372 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 HSD17B2P37059 387 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 CARSP49589 748 aaKnown RBP20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 ARHGAP19Q14CB8 494 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 TRIP13Q15645 432 aaPredicted RBP20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 TTLL9Q3SXZ7 439 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 TUBB8Q3ZCM7 444 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 NEPROQ6NW34 567 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 CILP2Q8IUL8 1156 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 LRRC8AQ8IWT6 810 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 SMPDL3AQ92484 453 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 SNRNP40Q96DI7 357 aaKnown RBP20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 ZFYVE21Q9BQ24 234 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 SOX17Q9H6I2 414 aaPredicted RBP20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 XAB2Q9HCS7 855 aaKnown RBP20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 ZNF304Q9HCX3 659 aa20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 UTP6Q9NYH9 597 aaKnown RBP20.64■□□□□ 0.89
SDR39U1-216ENST00000556175 CTSFQ9UBX1 484 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms