RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 PKDREJQ9NTG1 2253 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 IGLV3-12A0A075B6K2 115 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 A0A1W2PQ72 361 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 PSMD3O43242 534 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 C1orf105O95561 183 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 SOX11P35716 441 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 SNRPNP63162 240 aaKnown RBP13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 KLC1Q07866 573 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 MFAP5Q13361 173 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ELOAQ14241 798 aaKnown RBP13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 GRM7Q14831 915 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 SF1Q15637 639 aaKnown RBP13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 YOD1Q5VVQ6 348 aaPredicted RBP13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 LINC00523Q86TU6 105 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ARHGEF39Q8N4T4 335 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 HMGCLL1Q8TB92 370 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ASZ1Q8WWH4 475 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 C8orf44Q96CB5 159 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 THOC3Q96J01 351 aaKnown RBP13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 CALR3Q96L12 384 aaKnown RBP13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 PANX2Q96RD6 677 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 SELENOSQ9BQE4 189 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 MRM3Q9HC36 420 aaKnown RBP13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 SEMA3GQ9NS98 782 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 ENTPD4Q9Y227 616 aa13.71□□□□□ -0.21
CHMP4BP1-201ENST00000556017 SCN2AQ99250 2005 aa13.71□□□□□ -0.22
CHMP4BP1-201ENST00000556017 HEATR9A2RTY3 570 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 OR2A25A4D2G3 310 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 TARM1B6A8C7 271 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ZNF189O75820 626 aaPredicted RBP13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 WISP2O76076 250 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ZGLP1P0C6A0 271 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ETS1P14921 441 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ADRA1DP25100 572 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ARNTP27540 789 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 VSX2P58304 361 aaPredicted RBP13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CDC16Q13042 620 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 VWA2Q5GFL6 755 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ZC3H12BQ5HYM0 836 aaKnown RBP13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 TCTE1Q5JU00 501 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 WASHC2DQ5SRD0 308 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 RPUSD3Q6P087 351 aaKnown RBP13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 FBXO42Q6P3S6 717 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ISLR2Q6UXK2 745 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 LINC00696Q6ZRV3 163 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 RNF44Q7L0R7 432 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 TMEM139Q8IV31 216 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SPNS2Q8IVW8 549 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SRRM1Q8IYB3 904 aaKnown RBP13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SHISA5Q8N114 240 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 OR2L3Q8NG85 312 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 STT3BQ8TCJ2 826 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ZUFSPQ96AP4 578 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SLC22A18Q96BI1 424 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 HES6Q96HZ4 224 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 LMF1Q96S06 567 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 MIPEPQ99797 713 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 UNKQ9C0B0 810 aaKnown RBP13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 NXT1Q9UKK6 140 aaKnown RBP13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 TCAF1Q9Y4C2 921 aa13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 NCOA6Q14686 2063 aaPredicted RBP13.7□□□□□ -0.22
CHMP4BP1-201ENST00000556017 IGKV1-8A0A0C4DH67 115 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 HYKKA2RU49 373 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ERI2A8K979 691 aaKnown RBP13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SRPX2O60687 465 aaPredicted RBP13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 FTCDO95954 541 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 HPP00738 406 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CELA2AP08217 269 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PIM1P11309 404 aaPredicted RBP13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 COX6A1P12074 109 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 BDKRB1P46663 353 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 FASTKQ14296 549 aaKnown RBP13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 GBX1Q14549 363 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 TLR1Q15399 786 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 RBBP7Q16576 425 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PRTGQ2VWP7 1150 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CTSL3PQ5NE16 218 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SLC34A3Q8N130 599 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 DNAAF3Q8N9W5 541 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 OR6P1Q8NGX9 317 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 COG1Q8WTW3 980 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PEX13Q92968 403 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 MARVELD3Q96A59 401 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 LRRC45Q96CN5 670 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CNDP1Q96KN2 507 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 BIRC8Q96P09 236 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ALS2CR12Q96Q35 445 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CRB3Q9BUF7 120 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 TRIM5Q9C035 493 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ZNF160Q9HCG1 818 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CHRAC1Q9NRG0 131 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 TREX1Q9NSU2 369 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 AMFRQ9UKV5 643 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 F8P00451 2351 aa13.69□□□□□ -0.22
CHMP4BP1-201ENST00000556017 HIVEP1P15822 2718 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 A0A0J9YVX5 310 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PRMT5O14744 637 aaPredicted RBP13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PCDH17O14917 1159 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 LIASO43766 372 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms