RNA–Protein interactions for RNA: ENST00000555839.5

APEX1-211, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-211ENST00000555839 DEFB110Q30KQ9 67 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 CRTC2Q53ET0 693 aaPredicted RBP12.73□□□□□ -0.37
APEX1-211ENST00000555839 PRAMEF17Q5VTA0 474 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 TLDC1Q6P9B6 456 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 FAM199XQ6PEV8 388 aaPredicted RBP12.73□□□□□ -0.37
APEX1-211ENST00000555839 CAPN12Q6ZSI9 719 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 PIWIL4Q7Z3Z4 852 aaKnown RBP12.73□□□□□ -0.37
APEX1-211ENST00000555839 ZC3HC1Q86WB0 502 aaKnown RBP12.73□□□□□ -0.37
APEX1-211ENST00000555839 CCDC25Q86WR0 208 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 MCATQ8IVS2 390 aaKnown RBP12.73□□□□□ -0.37
APEX1-211ENST00000555839 SYTL1Q8IYJ3 562 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 MMGT1Q8N4V1 131 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 SLC38A9Q8NBW4 561 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 OR2L3Q8NG85 312 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 CT55Q8WUE5 264 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 STARD8Q92502 1023 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 MIPEPQ99797 713 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 DPH2Q9BQC3 489 aaPredicted RBP12.73□□□□□ -0.37
APEX1-211ENST00000555839 ARHGAP9Q9BRR9 750 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 SPRTNQ9H040 489 aaPredicted RBP12.73□□□□□ -0.37
APEX1-211ENST00000555839 PARVBQ9HBI1 364 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 IRAK4Q9NWZ3 460 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 UTP6Q9NYH9 597 aaKnown RBP12.73□□□□□ -0.37
APEX1-211ENST00000555839 EURLQ9NYK6 297 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 TXNDC16Q9P2K2 825 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 PCDHGA6Q9Y5G7 932 aa12.73□□□□□ -0.37
APEX1-211ENST00000555839 IGSF10Q6WRI0 2623 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 A0A1W2PPV9 198 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 CTAGE15A4D2H0 777 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 PABPN1LA6NDY0 278 aaKnown RBP12.72□□□□□ -0.37
APEX1-211ENST00000555839 TERTO14746 1132 aaKnown RBP12.72□□□□□ -0.37
APEX1-211ENST00000555839 ZSCAN9O15535 394 aaPredicted RBP12.72□□□□□ -0.37
APEX1-211ENST00000555839 HCRTR1O43613 425 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 CCNDBP1O95273 360 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 RECKO95980 971 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 HIST1H2AGP0C0S8 130 aaPredicted RBP12.72□□□□□ -0.37
APEX1-211ENST00000555839 CTAGE8P0CG41 777 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 HIST1H2ADP20671 130 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 SAT1P21673 171 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 FDXRP22570 491 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 F8A1P23610 371 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 PSMB5P28074 263 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 RORAP35398 523 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 MAGEA4P43358 317 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 SP140Q13342 867 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 TRADDQ15628 312 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 TBR1Q16650 682 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 FCRL6Q6DN72 434 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 SUSD1Q6UWL2 747 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 ZNF517Q6ZMY9 492 aaPredicted RBP12.72□□□□□ -0.37
APEX1-211ENST00000555839 CTAGE6Q86UF2 777 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 CTAGE4Q8IX94 777 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 DSELQ8IZU8 1212 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 ZNF480Q8WV37 535 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 SEC14L1Q92503 715 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 LINGO1Q96FE5 620 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 VPS39Q96JC1 886 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 HIST1H2AHQ96KK5 128 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 CCDC138Q96M89 665 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 HIST1H2AJQ99878 128 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 H2AFJQ9BTM1 129 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 NDC1Q9BTX1 674 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 ACAT2Q9BWD1 397 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 TRIM54Q9BYV2 358 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 AKIRIN1Q9H9L7 192 aaPredicted RBP12.72□□□□□ -0.37
APEX1-211ENST00000555839 MRPS30Q9NP92 439 aaKnown RBP12.72□□□□□ -0.37
APEX1-211ENST00000555839 SRPK3Q9UPE1 567 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 FARSAQ9Y285 508 aaKnown RBP12.72□□□□□ -0.37
APEX1-211ENST00000555839 KLK4Q9Y5K2 254 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 PSAT1Q9Y617 370 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 LOC400499M0QZD8 3231 aa12.72□□□□□ -0.37
APEX1-211ENST00000555839 TCRBV9S1A1TA0A576 114 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 E7ENX8 843 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 SRPX2O60687 465 aaPredicted RBP12.71□□□□□ -0.37
APEX1-211ENST00000555839 CREG1O75629 220 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 RAB40ALP0C0E4 278 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 PRKAR1AP10644 381 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 PTPN4P29074 926 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 ARSFP54793 590 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 SLC12A2P55011 1212 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 GUCY2DQ02846 1103 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 TAP2Q03519 686 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 PRDX1Q06830 199 aaKnown RBP12.71□□□□□ -0.37
APEX1-211ENST00000555839 CDC20Q12834 499 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 GLE1Q53GS7 698 aaKnown RBP12.71□□□□□ -0.37
APEX1-211ENST00000555839 TCTE1Q5JU00 501 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 THEMIS2Q5TEJ8 643 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 RHBDD2Q6NTF9 364 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 C16orf46Q6P387 395 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 BORAQ6PGQ7 559 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 ZDHHC24Q6UX98 284 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 CEP128Q6ZU80 1094 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 SPNS2Q8IVW8 549 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 NKAPQ8N5F7 415 aaKnown RBP12.71□□□□□ -0.37
APEX1-211ENST00000555839 ZNF655Q8N720 491 aaPredicted RBP12.71□□□□□ -0.37
APEX1-211ENST00000555839 DLG3Q92796 817 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 EXTL1Q92935 676 aa12.71□□□□□ -0.37
APEX1-211ENST00000555839 PDLIM5Q96HC4 596 aaKnown RBP12.71□□□□□ -0.37
APEX1-211ENST00000555839 BBC3Q96PG8 261 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms