RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 IDH3AP50213 366 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 RAB28P51157 221 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 PKNOX1P55347 436 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 MAZP56270 477 aaKnown RBP9.87□□□□□ -0.83
SRP54-208ENST00000555557 BTKQ06187 659 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 GRIK2Q13002 908 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 CHIT1Q13231 466 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 GPR18Q14330 331 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 CPSF6Q16630 551 aaKnown RBP eCLIP9.87□□□□□ -0.83
SRP54-208ENST00000555557 CATSPEREQ5SY80 951 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 KANK2Q63ZY3 851 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 FOXR1Q6PIV2 292 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 CACNA2D3Q8IZS8 1091 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 CCDC197Q8NCU1 140 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 OR2I1PQ8NGU4 316 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 METTL6Q8TCB7 284 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 LCN9Q8WX39 176 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 HBEGFQ99075 208 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 NTMT1Q9BV86 223 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 TUBB1Q9H4B7 451 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 ACTR8Q9H981 624 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 ERVMER34-1Q9H9K5 563 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 IL21RQ9HBE5 538 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 SPATA7Q9P0W8 599 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 TAC3Q9UHF0 121 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 RRP15Q9Y3B9 282 aaKnown RBP9.87□□□□□ -0.83
SRP54-208ENST00000555557 SPEGQ15772 3267 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 KIR2DS5A0A0G2JLQ3 304 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 A0A0G2JNG1 304 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 ATP6AP2A0A1C7CYW4 349 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 OR5K4A6NMS3 321 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 LMO7DNF2Z398 122 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 KIR2DS3K7RE56 304 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 CLGNO14967 610 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 ATP6AP2O75787 350 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 CLDN9O95484 217 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 ANXA6P08133 673 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 LINC00032P0C843 101 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 EBLN1P0CF75 366 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 HGFP14210 728 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 ALOX15P16050 662 aaPredicted RBP9.86□□□□□ -0.83
SRP54-208ENST00000555557 CD22P20273 847 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 VARSP26640 1264 aaKnown RBP9.86□□□□□ -0.83
SRP54-208ENST00000555557 NDUFS1P28331 727 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 EPHA3P29320 983 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 HTR6P50406 440 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 UBE2IP63279 158 aaKnown RBP9.86□□□□□ -0.83
SRP54-208ENST00000555557 IRF8Q02556 426 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 HHEXQ03014 270 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 KIR2DS5Q14953 304 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 ARHGAP19Q14CB8 494 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 PLCL1Q15111 1095 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 HLA-BQ31612 363 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 TRIM61Q5EBN2 209 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 XKR6Q5GH73 641 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 PRAMEF13Q5VWM6 474 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 PEAR1Q5VY43 1037 aaPredicted RBP9.86□□□□□ -0.83
SRP54-208ENST00000555557 EPGNQ6UW88 154 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 ALYREFQ86V81 257 aaKnown RBP9.86□□□□□ -0.83
SRP54-208ENST00000555557 AMIGO1Q86WK6 493 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 GATAD2AQ86YP4 633 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 KLHDC8AQ8IYD2 350 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 RAB42Q8N4Z0 105 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 TWIST2Q8WVJ9 160 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 SMPDL3AQ92484 453 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 MTFMTQ96DP5 389 aaKnown RBP9.86□□□□□ -0.83
SRP54-208ENST00000555557 C3orf30Q96M34 536 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 OR52B2Q96RD2 323 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 MYCBPQ99417 103 aaPredicted RBP9.86□□□□□ -0.83
SRP54-208ENST00000555557 FARSBQ9NSD9 589 aaKnown RBP9.86□□□□□ -0.83
SRP54-208ENST00000555557 SPHK1Q9NYA1 384 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 KCNK4Q9NYG8 393 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 ARL2BPQ9Y2Y0 163 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 KCNE2Q9Y6J6 123 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 FRYLO94915 3013 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 MUC6Q6W4X9 2439 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 CABIN1Q9Y6J0 2220 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 PRR33A8MZF0 331 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 SLCO1B7G3V0H7 640 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 BTN3A3O00478 584 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 PIP5K1BO14986 540 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 PPM1DO15297 605 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 NOBOXO60393 691 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 WFS1O76024 890 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 UROSP10746 265 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 MYF5P13349 255 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 PEBP1P30086 187 aaKnown RBP9.86□□□□□ -0.83
SRP54-208ENST00000555557 HSD17B2P37059 387 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 PI4KAP42356 2102 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 ARRB1P49407 418 aaPredicted RBP9.86□□□□□ -0.83
SRP54-208ENST00000555557 MEF2AQ02078 507 aaPredicted RBP9.86□□□□□ -0.83
SRP54-208ENST00000555557 DOC2AQ14183 400 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 DUOXA1Q1HG43 343 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 SGO1Q5FBB7 561 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 TMPRSS11BQ86T26 416 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 SLC9B2Q86UD5 537 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 DDIASQ8IXT1 998 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 ARL14Q8N4G2 192 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 OR2L8Q8NGY9 312 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 RILPQ96NA2 401 aa9.86□□□□□ -0.83
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