RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SMPDL3AQ92484 453 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 INPP5DQ92835 1189 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 PTERQ96BW5 349 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 LRRC39Q96DD0 335 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 EBNA1BP2Q99848 306 aaKnown RBP11.36□□□□□ -0.59
VRK1-204ENST00000555351 TRIM55Q9BYV6 548 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 SLC26A1Q9H2B4 701 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 ZNF71Q9NQZ8 489 aaPredicted RBP11.36□□□□□ -0.59
VRK1-204ENST00000555351 C20orf96Q9NUD7 363 aaPredicted RBP11.36□□□□□ -0.59
VRK1-204ENST00000555351 TRMT1Q9NXH9 659 aaKnown RBP11.36□□□□□ -0.59
VRK1-204ENST00000555351 UTP6Q9NYH9 597 aaKnown RBP11.36□□□□□ -0.59
VRK1-204ENST00000555351 IFT80Q9P2H3 777 aaPredicted RBP11.36□□□□□ -0.59
VRK1-204ENST00000555351 NDOR1Q9UHB4 597 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 ASIC3Q9UHC3 531 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 MED16Q9Y2X0 877 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 UBR5O95071 2799 aaPredicted RBP11.36□□□□□ -0.59
VRK1-204ENST00000555351 OR2A25A4D2G3 310 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 ARHGEF33A8MVX0 844 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 CCDC188H7C350 402 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 NDC80O14777 642 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 DSCR3O14972 297 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 CCNDBP1O95273 360 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 CMPK1P30085 196 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 FOLR3P41439 243 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 SLC1A2P43004 574 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 BDKRB1P46663 353 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 PGDP52209 483 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 TERF1P54274 439 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 SOX8P57073 446 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 ABATP80404 500 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 CBLBQ13191 982 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 CTBP1Q13363 440 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 FRG1Q14331 258 aaKnown RBP11.35□□□□□ -0.59
VRK1-204ENST00000555351 CRYMQ14894 314 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 MORF4L2Q15014 288 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 CCSMST1Q4G0I0 132 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.35□□□□□ -0.59
VRK1-204ENST00000555351 ZNF549Q6P9A3 640 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 RNF44Q7L0R7 432 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 OVCH1Q7RTY7 1134 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 DENND6AQ8IWF6 608 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 CNTN4Q8IWV2 1026 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 AGGF1Q8N302 714 aaeCLIP11.35□□□□□ -0.59
VRK1-204ENST00000555351 TTC29Q8NA56 475 aaPredicted RBP11.35□□□□□ -0.59
VRK1-204ENST00000555351 TEX19Q8NA77 164 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 C2CD4AQ8NCU7 369 aaPredicted RBP11.35□□□□□ -0.59
VRK1-204ENST00000555351 FER1L6-AS2Q96M78 137 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 SELENOSQ9BQE4 189 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 TRIM56Q9BRZ2 755 aaKnown RBP11.35□□□□□ -0.59
VRK1-204ENST00000555351 SLC25A23Q9BV35 468 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 DDX47Q9H0S4 455 aaKnown RBP11.35□□□□□ -0.59
VRK1-204ENST00000555351 EPN3Q9H201 632 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 IRAK4Q9NWZ3 460 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 GALPQ9UBC7 116 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 DHCR7Q9UBM7 475 aaKnown RBP11.35□□□□□ -0.59
VRK1-204ENST00000555351 NXT1Q9UKK6 140 aaKnown RBP11.35□□□□□ -0.59
VRK1-204ENST00000555351 CORO1CQ9ULV4 474 aaPredicted RBP11.35□□□□□ -0.59
VRK1-204ENST00000555351 ZNF451Q9Y4E5 1061 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 SAR1BQ9Y6B6 198 aa11.35□□□□□ -0.59
VRK1-204ENST00000555351 SNRNP200O75643 2136 aaKnown RBP11.35□□□□□ -0.59
VRK1-204ENST00000555351 ARGFXA6NJG6 315 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 ZBTB14O43829 449 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 VPS26AO75436 327 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 HRH2P25021 359 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 PNLIPRP1P54315 467 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 FOXK1P85037 733 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 PRDX1Q06830 199 aaKnown RBP11.34□□□□□ -0.59
VRK1-204ENST00000555351 ILF2Q12905 390 aaKnown RBP11.34□□□□□ -0.59
VRK1-204ENST00000555351 HSP90AA5PQ58FG0 334 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 MLIPQ5VWP3 458 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 PRMT9Q6P2P2 845 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 CYHR1Q6ZMK1 362 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 MRGPREQ86SM8 312 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 KCNMB4Q86W47 210 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 CREG2Q8IUH2 290 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 PDIK1LQ8N165 341 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 C2orf73Q8N5S3 287 aaPredicted RBP11.34□□□□□ -0.59
VRK1-204ENST00000555351 GIMAP7Q8NHV1 300 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 CD200R1Q8TD46 325 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 MVB12AQ96EY5 273 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 VPS50Q96JG6 964 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 NAPGQ99747 312 aaPredicted RBP11.34□□□□□ -0.59
VRK1-204ENST00000555351 MIPEPQ99797 713 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 ZFYVE21Q9BQ24 234 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 AARSD1Q9BTE6 412 aaKnown RBP11.34□□□□□ -0.59
VRK1-204ENST00000555351 FBXO6Q9NRD1 293 aaPredicted RBP11.34□□□□□ -0.59
VRK1-204ENST00000555351 CUTCQ9NTM9 273 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 C5AR2Q9P296 337 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 CIDEBQ9UHD4 219 aa11.34□□□□□ -0.59
VRK1-204ENST00000555351 RUVBL2Q9Y230 463 aaKnown RBP11.34□□□□□ -0.59
VRK1-204ENST00000555351 PTRH2Q9Y3E5 179 aaKnown RBP11.34□□□□□ -0.59
VRK1-204ENST00000555351 SPTBP11277 2137 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 FER1L5A0AVI2 2057 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 E7ENX8 843 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 PEX12O00623 359 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 TXNDC9O14530 226 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 CTSVO60911 334 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 HAUS5O94927 633 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 SLC16A8O95907 504 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 CTSBP07858 339 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms