RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 LMNTD1Q8N9Z9 388 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 OR2A1Q8NGT9 310 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 CCDC74BQ96LY2 380 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 SGPP1Q9BX95 441 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 PITPNM3Q9BZ71 974 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 STRADBQ9C0K7 418 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 TMEM9Q9P0T7 183 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 SEMA5BQ9P283 1151 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 CPSF2Q9P2I0 782 aaKnown RBP13.79□□□□□ -0.2
CHD8-208ENST00000555301 KLHL3Q9UH77 587 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 MID2Q9UJV3 735 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 PTBP2Q9UKA9 531 aaKnown RBP13.79□□□□□ -0.2
CHD8-208ENST00000555301 A0A0J9YY10 115 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 HGSO14964 777 aaPredicted RBP13.78□□□□□ -0.2
CHD8-208ENST00000555301 MAP3K7O43318 606 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 STK16O75716 305 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 JUPP14923 745 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 MPSTP25325 297 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 CMPK1P30085 196 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 SLC6A12P48065 614 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 PDX1P52945 283 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 ALDH18A1P54886 795 aaKnown RBP13.78□□□□□ -0.2
CHD8-208ENST00000555301 PRDX1Q06830 199 aaKnown RBP13.78□□□□□ -0.2
CHD8-208ENST00000555301 PFKFB4Q16877 469 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 ISXQ2M1V0 245 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 PTCHD3Q3KNS1 767 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 SNAP47Q5SQN1 464 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 PHF19Q5T6S3 580 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 AGBL2Q5U5Z8 902 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 PRAMEF13Q5VWM6 474 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 METTL2BQ6P1Q9 378 aaKnown RBP13.78□□□□□ -0.2
CHD8-208ENST00000555301 C16orf46Q6P387 395 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 LCTLQ6UWM7 567 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 ARHGAP22Q7Z5H3 698 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 RAB44Q7Z6P3 723 aaPredicted RBP13.78□□□□□ -0.2
CHD8-208ENST00000555301 KMT5CQ86Y97 462 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 KLHDC8AQ8IYD2 350 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 TMEM151AQ8N4L1 468 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 FLVCR1-AS1Q8TAF5 88 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 RDH11Q8TC12 318 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 UBTD2Q8WUN7 234 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 ZBTB9Q96C00 473 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 PYCR2Q96C36 320 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 MAP3K3Q99759 626 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 HAUS8Q9BT25 410 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 ACAT2Q9BWD1 397 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 SEMA6CQ9H3T2 930 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 INTS7Q9NVH2 962 aaKnown RBP13.78□□□□□ -0.2
CHD8-208ENST00000555301 AKAP7Q9P0M2 348 aaPredicted RBP13.78□□□□□ -0.2
CHD8-208ENST00000555301 TAC3Q9UHF0 121 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 PLLPQ9Y342 182 aa13.78□□□□□ -0.2
CHD8-208ENST00000555301 TNPO3Q9Y5L0 923 aaKnown RBP13.78□□□□□ -0.2
CHD8-208ENST00000555301 TARM1B6A8C7 271 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 STX16-NPEPL1H3BU86 382 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 STX16O14662 325 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 TAPBPO15533 448 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 KIF1CO43896 1103 aaKnown RBP13.77□□□□□ -0.21
CHD8-208ENST00000555301 PLIN3O60664 434 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 CSO75390 466 aaKnown RBP13.77□□□□□ -0.21
CHD8-208ENST00000555301 SPAG7O75391 227 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 ZBTB11O95625 1053 aaPredicted RBP13.77□□□□□ -0.21
CHD8-208ENST00000555301 PROCP04070 461 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 SBK3P0C264 359 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 HRH2P25021 359 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 HSPA7P48741 367 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 ARL4DP49703 201 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 SETDB1Q15047 1291 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 ZXDCQ2QGD7 858 aaPredicted RBP13.77□□□□□ -0.21
CHD8-208ENST00000555301 ICE2Q659A1 982 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 TMPRSS7Q7RTY8 843 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 LRRC70Q7Z2Q7 622 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 DGLUCYQ7Z3D6 616 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 B3GNT8Q7Z7M8 397 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 THOC6Q86W42 341 aaKnown RBP13.77□□□□□ -0.21
CHD8-208ENST00000555301 CCDC63Q8NA47 563 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 OR2L3Q8NG85 312 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 KLHL6Q8WZ60 621 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 ZUFSPQ96AP4 578 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 CCDC126Q96EE4 140 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 SH3GL2Q99962 352 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 TMEM79Q9BSE2 394 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 CAPS2Q9BXY5 557 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 CD244Q9BZW8 370 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 ZNF768Q9H5H4 540 aaKnown RBP13.77□□□□□ -0.21
CHD8-208ENST00000555301 MRPS30Q9NP92 439 aaKnown RBP13.77□□□□□ -0.21
CHD8-208ENST00000555301 ABCF3Q9NUQ8 709 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 EMCNQ9ULC0 261 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 SLC22A14Q9Y267 594 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 KCNE2Q9Y6J6 123 aa13.77□□□□□ -0.21
CHD8-208ENST00000555301 IGHV5-51A0A0C4DH38 117 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 SLC9B1P1A6NJY1 282 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 A8MU76 341 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 DYNC1I1O14576 645 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 ATP8B1O43520 1251 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 TYROBPO43914 113 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 SASH3O75995 380 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 WDR47O94967 919 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 MYL2P10916 166 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 CREB1P16220 341 aa13.76□□□□□ -0.21
CHD8-208ENST00000555301 NPPBP16860 134 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms