RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SETMARQ53H47 684 aaPredicted RBP10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 COLEC12Q5KU26 742 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 RSPO2Q6UXX9 243 aaPredicted RBP10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 CCDC81Q6ZN84 652 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 SNX20Q7Z614 316 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 TMEM179BQ7Z7N9 219 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 CALHM3Q86XJ0 350 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 NPAS4Q8IUM7 802 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 HS3ST5Q8IZT8 346 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 STK40Q8N2I9 435 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 OR10A6Q8NH74 314 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 ANGPTL6Q8NI99 470 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 GTF2H4Q92759 462 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 TMCO6Q96DC7 493 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 MED30Q96HR3 178 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 LTB4R2Q9NPC1 389 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 PLCXD1Q9NUJ7 323 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 CRNNQ9UBG3 495 aaPredicted RBP10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 SAMD4AQ9UPU9 718 aaKnown RBP10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 TRAPPC4Q9Y296 219 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 CARD8Q9Y2G2 431 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 WBP11Q9Y2W2 641 aaKnown RBP10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 PKP3Q9Y446 797 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 RAI2Q9Y5P3 530 aa10.43□□□□□ -0.74
MTHFD1-210ENST00000555252 VWA8A3KMH1 1905 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 ZBBXA8MT70 800 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 A8MU76 341 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 FAM25AB3EWG3 89 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 FAM25CB3EWG5 89 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 FAM25GB3EWG6 89 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 E2F3O00716 465 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 GUCY1B2O75343 617 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 ERN1O75460 977 aaKnown RBP10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 RPLP0P05388 317 aaKnown RBP10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 GALTP07902 379 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 CHRNB1P11230 501 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 G6PDP11413 515 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 ATF6P18850 670 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 FPR1P21462 350 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 PTGER3P43115 390 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 HTR3AP46098 478 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 CLK3P49761 638 aaKnown RBP10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 GNG2P59768 71 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 IL2P60568 153 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 DGCR6Q14129 220 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 MAPKAPK3Q16644 382 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 RTP2Q5QGT7 225 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 FAM219BQ5XKK7 198 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 SLC8B1Q6J4K2 584 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 HORMAD1Q86X24 394 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 UBQLNLQ8IYU4 475 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 PGBD3Q8N328 593 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 PARP16Q8N5Y8 322 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 MDGA1Q8NFP4 955 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 TTC9Q92623 222 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 KCNJ9Q92806 393 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 B3GALT6Q96L58 329 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 GPR21Q99679 349 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 THUMPD3Q9BV44 507 aaKnown RBP10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 STARD7Q9NQZ5 370 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 NUDT4Q9NZJ9 180 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 FAM50BQ9Y247 325 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 RNF6Q9Y252 685 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 MED16Q9Y2X0 877 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 PCDHGB6Q9Y5F9 930 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 TNPO3Q9Y5L0 923 aaKnown RBP10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 N6AMT1Q9Y5N5 214 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 BACE2Q9Y5Z0 518 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 CHD5Q8TDI0 1954 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 TRBV5-3A0A0A0MS03 114 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 ZNF840PA6NDX5 716 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 ANKRD66B4E2M5 251 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 ARVCFO00192 962 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 BTN3A1O00481 513 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 STX7O15400 261 aaKnown RBP10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 DFNA5O60443 496 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 OR4F21O95013 312 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 PRLP01236 227 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 ESR1P03372 595 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 F11P03951 625 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 DNAJA1P31689 397 aaKnown RBP10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 MC4RP32245 332 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 RGRP47804 291 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 OLR1P78380 273 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 SP3Q02447 781 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 GBX1Q14549 363 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 PCBP2Q15366 365 aaKnown RBP eCLIP10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 TSNQ15631 228 aaKnown RBP10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 KIAA1614Q5VZ46 1190 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 TMC5Q6UXY8 1006 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 GPSM1Q86YR5 675 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 DENND1CQ8IV53 801 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 FBXO22Q8NEZ5 403 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 LPCAT1Q8NF37 534 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 FLCNQ8NFG4 579 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 HHIPL1Q96JK4 782 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 C19orf43Q9BQ61 176 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 CEP44Q9C0F1 390 aa10.42□□□□□ -0.74
MTHFD1-210ENST00000555252 C1orf109Q9NX04 203 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms