RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 INIPQ9NRY2 104 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 C1orf109Q9NX04 203 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 ZNF860A6NHJ4 632 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 FPGTO14772 594 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 B3GALT4O96024 378 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 ASGR2P07307 311 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 VIPR1P32241 457 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 PAGE3Q5JUK9 113 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 ATG14Q6ZNE5 492 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 CYS1Q717R9 158 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 SMYD1Q8NB12 490 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 CATSPER1Q8NEC5 780 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 OR7A2PQ8NGA2 310 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 OR4E2Q8NGC2 313 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 PIH1D2Q8WWB5 315 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 SIPA1Q96FS4 1042 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 HERC2P3Q9BVR0 1158 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 PBX4Q9BYU1 374 aa11.91□□□□□ -0.5
ARHGEF40-206ENST00000555232 EI24O14681 340 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 TYRP1P17643 537 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 MAPK1P28482 360 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 RXRGP48443 463 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 MANFP55145 182 aaKnown RBP11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 RPS13P62277 151 aaKnown RBP11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 ERVK-8P63133 956 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 ID2Q02363 134 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 FAM78AQ5JUQ0 283 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 TMEM240Q5SV17 173 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 CCNYL2Q5T2Q4 361 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 CPTPQ5TA50 214 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 FAM46CQ5VWP2 391 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 BEND5Q7L4P6 421 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 CLVS1Q8IUQ0 354 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 OR2A12Q8NGT7 310 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 GAB3Q8WWW8 586 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 BDH2Q9BUT1 245 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 PRUNE2Q8WUY3 3088 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 H3BN98 237 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 K7ESM1 405 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 TRMUO75648 421 aaKnown RBP11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 C6P13671 934 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 HOXB2P14652 356 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 GPR33Q49SQ1 333 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 ZNF805Q5CZA5 627 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 ASTLQ6HA08 431 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 BRAT1Q6PJG6 821 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 SH2D5Q6ZV89 423 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 ANKRD33Q7Z3H0 272 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 THOC6Q86W42 341 aaKnown RBP11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 MICU2Q8IYU8 434 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 OR4A15Q8NGL6 344 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 NXPE3Q969Y0 559 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 CHID1Q9BWS9 393 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 SORBS1Q9BX66 1292 aaKnown RBP11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 TPSD1Q9BZJ3 242 aa11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 PRPF19Q9UMS4 504 aaKnown RBP11.9□□□□□ -0.5
ARHGEF40-206ENST00000555232 VILLO15195 856 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 PEX11BO96011 259 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 PDYNP01213 254 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 ALDOCP09972 364 aaKnown RBP11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 CCNIQ14094 377 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 LIMS2Q7Z4I7 341 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 GLYATL1Q969I3 302 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 NRBF2Q96F24 287 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 TTLL2Q9BWV7 592 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 MCOLN1Q9GZU1 580 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 ZBP1Q9H171 429 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 SLC32A1Q9H598 525 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 IL21Q9HBE4 155 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 IMPAD1Q9NX62 359 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 ACSL6Q9UKU0 697 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 PDE10AQ9Y233 779 aa11.9□□□□□ -0.51
ARHGEF40-206ENST00000555232 MAD2L1Q13257 205 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 ZNF234Q14588 700 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 CATSPEREQ5SY80 951 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 FRG2Q64ET8 278 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 ZSWIM9Q86XI8 627 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 OR2T34Q8NGX1 318 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 OR2T3Q8NH03 318 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 SMARCD2Q92925 531 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 RMND5BQ96G75 393 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 LMLNQ96KR4 655 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 FRG2BQ96QU4 278 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 P2RY13Q9BPV8 354 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 C1QTNF1Q9BXJ1 281 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 WDR26Q9H7D7 661 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 TM7SF3Q9NS93 570 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 NDUFA13Q9P0J0 144 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 ZNF451Q9Y4E5 1061 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 PLXNB2O15031 1838 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 SLC28A1O00337 649 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 MTHFRP42898 656 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 EIF2B2P49770 351 aaKnown RBP11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 RPS26P62854 115 aaKnown RBP11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 HSF5Q4G112 596 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 PARS2Q7L3T8 475 aaKnown RBP11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 PPCDCQ96CD2 204 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 TEX37Q96LM6 180 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 RBCK1Q9BYM8 510 aa11.89□□□□□ -0.51
ARHGEF40-206ENST00000555232 CD244Q9BZW8 370 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms