RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 DEAF1O75398 565 aaPredicted RBP10.85□□□□□ -0.67
SRP54-205ENST00000554803 CRCPO75575 148 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 CDK14O94921 469 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 ESRRBO95718 433 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 LDLRP01130 860 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 GP1BBP13224 206 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 GFAPP14136 432 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 TCN1P20061 433 aaPredicted RBP10.85□□□□□ -0.67
SRP54-205ENST00000554803 MSH3P20585 1137 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 SLC6A2P23975 617 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 HOXD9P28356 352 aaPredicted RBP10.85□□□□□ -0.67
SRP54-205ENST00000554803 GRIA3P42263 894 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 STC1P52823 247 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 TMBIM6P55061 237 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 VAC14Q08AM6 782 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 STARD3Q14849 445 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 CYTH1Q15438 398 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 NRF1Q16656 503 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 CCNYL2Q5T2Q4 361 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 AFTPHQ6ULP2 937 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 ZNF574Q6ZN55 896 aaPredicted RBP10.85□□□□□ -0.67
SRP54-205ENST00000554803 GPR180Q86V85 440 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 PHYKPLQ8IUZ5 450 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 FUNDC1Q8IVP5 155 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 SLC15A3Q8IY34 581 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 FAM9CQ8IZT9 166 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 DHRSXQ8N5I4 330 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 RNF148Q8N7C7 305 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 PTGR2Q8N8N7 351 aaPredicted RBP10.85□□□□□ -0.67
SRP54-205ENST00000554803 FAM47BQ8NA70 645 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 HJURPQ8NCD3 748 aaPredicted RBP10.85□□□□□ -0.67
SRP54-205ENST00000554803 OR56A4Q8NGH8 313 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 OR6P1Q8NGX9 317 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 FNDC8Q8TC99 324 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 CANT1Q8WVQ1 401 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 SNX19Q92543 992 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 BORCS5Q969J3 196 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 ITFG2Q969R8 447 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 SIPA1Q96FS4 1042 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 PPP1R36Q96LQ0 422 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 ZNF578Q96N58 590 aaPredicted RBP10.85□□□□□ -0.67
SRP54-205ENST00000554803 ATOH8Q96SQ7 321 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 BBS2Q9BXC9 721 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 ALG9Q9H6U8 611 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 TM9SF3Q9HD45 589 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 CATSPERZQ9NTU4 200 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 TBC1D23Q9NUY8 699 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 AIG1Q9NVV5 245 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 SLC2A6Q9UGQ3 507 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 SEPT3Q9UH03 358 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 BLOC1S6Q9UL45 172 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 FAF1Q9UNN5 650 aaPredicted RBP10.85□□□□□ -0.67
SRP54-205ENST00000554803 PCDHA9Q9Y5H5 950 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 TNPO3Q9Y5L0 923 aaKnown RBP10.85□□□□□ -0.67
SRP54-205ENST00000554803 HEMK1Q9Y5R4 338 aaPredicted RBP10.85□□□□□ -0.67
SRP54-205ENST00000554803 DNAJC15Q9Y5T4 150 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 STON1Q9Y6Q2 735 aa10.85□□□□□ -0.67
SRP54-205ENST00000554803 ICE1Q9Y2F5 2266 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 CCDC78A2IDD5 438 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 NR5A2O00482 541 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 ARPC2O15144 300 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 CLOCKO15516 846 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 LDB2O43679 373 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 GMNNO75496 209 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 NDST3O95803 873 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 CYBBP04839 570 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 RPS17P08708 135 aaKnown RBP10.84□□□□□ -0.67
SRP54-205ENST00000554803 TYRP14679 529 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 GMPRP36959 345 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 ACVRL1P37023 503 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 CCR10P46092 362 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 HLCSP50747 726 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 CDH4P55283 916 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 ERVK-8P63133 956 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 MAD2L1Q13257 205 aaPredicted RBP10.84□□□□□ -0.67
SRP54-205ENST00000554803 TOP3AQ13472 1001 aaPredicted RBP10.84□□□□□ -0.67
SRP54-205ENST00000554803 SERINC3Q13530 473 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 ZNF460Q14592 562 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 MYBPC3Q14896 1274 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 GEN1Q17RS7 908 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 XKR7Q5GH72 579 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 SIRPB2Q5JXA9 342 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 RBM48Q5RL73 367 aaKnown RBP10.84□□□□□ -0.67
SRP54-205ENST00000554803 CXorf57Q6NSI4 855 aaKnown RBP10.84□□□□□ -0.67
SRP54-205ENST00000554803 HMBOX1Q6NT76 420 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 UGT3A1Q6NUS8 523 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 TTC23LQ6PF05 361 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 LAYNQ6UX15 382 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 RBM12BQ8IXT5 1001 aaKnown RBP10.84□□□□□ -0.67
SRP54-205ENST00000554803 ADGRG5Q8IZF4 528 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 STK40Q8N2I9 435 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 FBXO39Q8N4B4 442 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 CBR4Q8N4T8 237 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 OR4L1Q8NH43 312 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 HDAC10Q969S8 669 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 PHF21BQ96EK2 531 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 HMCESQ96FZ2 354 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 MARK4Q96L34 752 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 CCDC115Q96NT0 180 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 TRIB3Q96RU7 358 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms