RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 KDELR1P24390 212 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 TEAD1P28347 426 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 ARHGAP25P42331 645 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 PIK3CGP48736 1102 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 PEX5P50542 639 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 THOP1P52888 689 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 PDX1P52945 283 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 HADHBP55084 474 aaKnown RBP4.12□□□□□ -1.75
VTI1B-203ENST00000554636 ELLP55199 621 aaPredicted RBP4.12□□□□□ -1.75
VTI1B-203ENST00000554636 PPARDQ03181 441 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 PPIDQ08752 370 aaKnown RBP4.12□□□□□ -1.75
VTI1B-203ENST00000554636 ZBTB17Q13105 803 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 C1orf61Q13536 156 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 MESDQ14696 234 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 PTPRRQ15256 657 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 TAZQ16635 292 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 DEFB133Q30KQ1 61 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 FAM182AQ5T1J6 154 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 ARMC12Q5T9G4 340 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 MARC1Q5VT66 337 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 LRRC38Q5VT99 294 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 SLC9A4Q6AI14 798 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 ENPP7Q6UWV6 458 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 NPNTQ6UXI9 565 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 RFLNAQ6ZTI6 216 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 EFL1Q7Z2Z2 1120 aaKnown RBP4.12□□□□□ -1.75
VTI1B-203ENST00000554636 HSD11B1LQ7Z5J1 315 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 TECPR1Q7Z6L1 1165 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 AMIGO2Q86SJ2 522 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 TSPAN33Q86UF1 283 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 VSIG1Q86XK7 387 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 LRRC49Q8IUZ0 686 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 CNGA4Q8IV77 575 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 SLC35F3Q8IY50 421 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 CCDC13Q8IYE1 715 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 BBS5Q8N3I7 341 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 KCTD6Q8NC69 237 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 ARRDC2Q8TBH0 407 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 NSMCE1Q8WV22 266 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 PIH1D2Q8WWB5 315 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 OR1E3Q8WZA6 343 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 SCAMP4Q969E2 229 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 TSACCQ96A04 125 aaPredicted RBP4.12□□□□□ -1.75
VTI1B-203ENST00000554636 NXPE2Q96DL1 559 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 NUS1Q96E22 293 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 CCDC42Q96M95 316 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 OLFM3Q96PB7 478 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 RNF157Q96PX1 679 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 IL12RB2Q99665 862 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 SEMA3CQ99985 751 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 APOOQ9BUR5 198 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 TDRD1Q9BXT4 1180 aaKnown RBP4.12□□□□□ -1.75
VTI1B-203ENST00000554636 POLR1EQ9GZS1 481 aaKnown RBP4.12□□□□□ -1.75
VTI1B-203ENST00000554636 USP29Q9HBJ7 922 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 FGF22Q9HCT0 170 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 ZNHIT6Q9NWK9 470 aaKnown RBP4.12□□□□□ -1.75
VTI1B-203ENST00000554636 FEZ2Q9UHY8 353 aaPredicted RBP4.12□□□□□ -1.75
VTI1B-203ENST00000554636 PHTF1Q9UMS5 762 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 PPIL1Q9Y3C6 166 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 NEU2Q9Y3R4 380 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 HYOU1Q9Y4L1 999 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 OR1A2Q9Y585 309 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 RAI2Q9Y5P3 530 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 ZFC3H1O60293 1989 aaKnown RBP4.12□□□□□ -1.75
VTI1B-203ENST00000554636 CHD6Q8TD26 2715 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 LOC400499M0QZD8 3231 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 A0A0J9YYE9 177 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 A0A0U1RQS6 177 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 A0A1W2PNU3 283 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 LRRD1A4D1F6 860 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 EME2A4GXA9 379 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 TMEM202A6NGA9 273 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 CAPN8A6NHC0 703 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 LINC00473A8K010 186 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 A8MX80 341 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 M0QYG6 137 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 CACNB4O00305 520 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 APOL1O14791 398 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 CASC3O15234 703 aaKnown RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 PSTPIP1O43586 416 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 TLX3O43711 291 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 TNFP01375 233 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 TRBC1P01850 177 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 ANXA6P08133 673 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 CYP2A6P11509 494 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 CCNB1P14635 433 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 JUPP14923 745 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 PECAM1P16284 738 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 TGM2P21980 687 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 LPOP22079 712 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 CCNCP24863 283 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 HNF1BP35680 557 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 TRIM23P36406 574 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 CDKN2BP42772 138 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 SLC1A1P43005 524 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 MARCKSL1P49006 195 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 BLKP51451 505 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 DUSP3P51452 185 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 ZNF75DP51815 510 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 MAP2K6P52564 334 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms