RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 SCARA5Q6ZMJ2 495 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 PRR23BQ6ZRT6 265 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 TRMT11Q7Z4G4 463 aaKnown RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 SPRED1Q7Z699 444 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 THEM5Q8N1Q8 247 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 CISD2Q8N5K1 135 aaKnown RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 CCNYQ8ND76 341 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 ADCY4Q8NFM4 1077 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 OR8J2Q8NGG1 315 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 ADAMTS14Q8WXS8 1223 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 PTPRN2Q92932 1015 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 TNFRSF14Q92956 283 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 ADIPOR1Q96A54 375 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 PTERQ96BW5 349 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 SENP8Q96LD8 212 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 LINC00615Q96LM1 132 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 WDFY2Q96P53 400 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 TRNT1Q96Q11 434 aaKnown RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 TM9SF2Q99805 663 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 GABRG3Q99928 467 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 SEMA4CQ9C0C4 833 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 BTBD1Q9H0C5 482 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 EPN3Q9H201 632 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 ZSCAN16Q9H4T2 348 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 SLC32A1Q9H598 525 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 PCDH9Q9HC56 1237 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 ETNK2Q9NVF9 386 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 C2orf42Q9NWW7 574 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 LRWD1Q9UFC0 647 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 WARS2Q9UGM6 360 aaKnown RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF229Q9UJW7 825 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 ANAPC2Q9UJX6 822 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 TSPAN16Q9UKR8 245 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 STAP1Q9ULZ2 295 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 GPC6Q9Y625 555 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 C5orf42Q9H799 3197 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 LNP1A1A4G5 178 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 NPIPB15A6NHN6 443 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SUPT3HB4E1H0 165 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 O00370 1275 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 HCRTR2O43614 444 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 NFATC1O95644 943 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 OXSR1O95747 527 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 BMP15O95972 392 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 IL6P05231 212 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 KRT16P08779 473 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZDHHC11BP0C7U3 371 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZCCHC18P0CG32 403 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 UROSP10746 265 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 FUT1P19526 365 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 NFKB1P19838 968 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 MAGP20916 626 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 WARSP23381 471 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 GABRR2P28476 465 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SYKP43405 635 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 KIR2DL1P43626 348 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TAF6P49848 677 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 MAP2K6P52564 334 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 AIF1P55008 147 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PEX3P56589 373 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PSMA6P60900 246 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SNRPFP62306 86 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 RELBQ01201 579 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 MGAT5Q09328 741 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SNTB2Q13425 540 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 IL10RAQ13651 578 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TUBB2AQ13885 445 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PIGHQ14442 188 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TMEM132DQ14C87 1099 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 DUOXA1Q1HG43 343 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 HKDC1Q2TB90 917 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CT83Q5H943 113 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 RALGPS1Q5JS13 557 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 INTS6LQ5JSJ4 861 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 EOGTQ5NDL2 527 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 KRT79Q5XKE5 535 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 WBP2NLQ6ICG8 309 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 FAM122CQ6P4D5 195 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 METAP1DQ6UB28 335 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CCNI2Q6ZMN8 369 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 WDR88Q6ZMY6 472 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 NDUFAF7Q7L592 441 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TRMT1LQ7Z2T5 733 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF677Q86XU0 584 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SYT12Q8IV01 421 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SERPINA12Q8IW75 414 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 KLHL7Q8IXQ5 586 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PYROXD2Q8N2H3 581 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 LKAAEAR1Q8TD35 194 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ACTRT2Q8TDY3 377 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 DTD1Q8TEA8 209 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZCCHC14Q8WYQ9 949 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 OR1E3Q8WZA6 343 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CORO2AQ92828 525 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ISG20Q96AZ6 181 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CEP19Q96LK0 163 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 INSM2Q96T92 566 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 BPIFA3Q9BQP9 254 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 REEP2Q9BRK0 252 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TUBB2BQ9BVA1 445 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms