RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ISXQ2M1V0 245 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 ZNF658BQ4V348 819 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-208ENST00000553868 SULT1C3Q6IMI6 304 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 METTL2BQ6P1Q9 378 aaKnown RBP14.06□□□□□ -0.16
SHMT2-208ENST00000553868 TTC23LQ6PF05 361 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 SBSNQ6UWP8 590 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 ENPP7Q6UWV6 458 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 Q6ZSR6 202 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 ZCCHC23Q6ZST2 131 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 FAM47EQ6ZV65 393 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 C11orf96Q7Z7L8 435 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 PDPRQ8NCN5 879 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 OR6Y1Q8NGX8 325 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 PHF21BQ96EK2 531 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 OR2M4Q96R27 311 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 EGFL8Q99944 293 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 DRC3Q9H069 523 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 EML4Q9HC35 981 aaKnown RBP14.06□□□□□ -0.16
SHMT2-208ENST00000553868 CYP4F12Q9HCS2 524 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 UCKL1Q9NWZ5 548 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 KLQ9UEF7 1012 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 PLEKHB1Q9UF11 243 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-208ENST00000553868 IKZF3Q9UKT9 509 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 TDRD6O60522 2096 aaKnown RBP14.06□□□□□ -0.16
SHMT2-208ENST00000553868 NEMP2A6NFY4 417 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 TMEM202A6NGA9 273 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 IFRD1O00458 451 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-208ENST00000553868 TGDSO95455 350 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 SLC35G4P0C7Q5 338 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 PREPP48147 710 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 HNMTP50135 292 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 HK2P52789 917 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 CYP4F2P78329 520 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 OCRLQ01968 901 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 OVGP1Q12889 678 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 LRP8Q14114 963 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 CLCA4Q14CN2 919 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 SETDB1Q15047 1291 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 TBR1Q16650 682 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 PPP1R3AQ16821 1122 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 PLA2G4EQ3MJ16 856 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 PYCR3Q53H96 274 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 ZNF678Q5SXM1 525 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 GKAP1Q5VSY0 366 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-208ENST00000553868 ANKS6Q68DC2 871 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 IGF2-ASQ6U949 168 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 XKR5Q6UX68 686 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 UNC5DQ6UXZ4 953 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 CHST15Q7LFX5 561 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-208ENST00000553868 VRK3Q8IV63 474 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 SPNS2Q8IVW8 549 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 AFAP1L2Q8N4X5 818 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 MAGEC3Q8TD91 643 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 ATL1Q8WXF7 558 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 KLHDC7BQ96G42 594 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 CARS2Q9HA77 564 aaKnown RBP14.05□□□□□ -0.16
SHMT2-208ENST00000553868 FGF22Q9HCT0 170 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 SLCO1B3Q9NPD5 702 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 ARL15Q9NXU5 204 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 UTP6Q9NYH9 597 aaKnown RBP14.05□□□□□ -0.16
SHMT2-208ENST00000553868 ATXN7L1Q9ULK2 861 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-208ENST00000553868 SUFUQ9UMX1 484 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 STK38LQ9Y2H1 464 aa14.05□□□□□ -0.16
SHMT2-208ENST00000553868 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-208ENST00000553868 DOCK9Q9BZ29 2069 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 NCF1BA6NI72 391 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-208ENST00000553868 NCF1CA8MVU1 366 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-208ENST00000553868 CASC3O15234 703 aaKnown RBP14.04□□□□□ -0.16
SHMT2-208ENST00000553868 PSIP1O75475 530 aaKnown RBP14.04□□□□□ -0.16
SHMT2-208ENST00000553868 SUPT7LO94864 414 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 ITGB2P05107 769 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 ACP5P13686 325 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 NCF1P14598 390 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-208ENST00000553868 IDSP22304 550 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 GNPDA1P46926 289 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 RPIAP49247 311 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 GALNT1Q10472 559 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-208ENST00000553868 ABRQ12979 859 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 PRKAA1Q13131 559 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 NFE2L1Q14494 772 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 METRNLQ641Q3 311 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 IQCHQ86VS3 1027 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 RASGRP3Q8IV61 690 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 HOMEZQ8IX15 550 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 MFSD2AQ8NA29 543 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 FBXO15Q8NCQ5 510 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-208ENST00000553868 ZNF473Q8WTR7 871 aaKnown RBP14.04□□□□□ -0.16
SHMT2-208ENST00000553868 TMEM237Q96Q45 408 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 SIKE1Q9BRV8 207 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 C1QTNF3Q9BXJ4 246 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 TRIM55Q9BYV6 548 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 ILKAPQ9H0C8 392 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-208ENST00000553868 ABCG4Q9H172 646 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 SLC25A18Q9H1K4 315 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 ERVMER34-1Q9H9K5 563 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 WWOXQ9NZC7 414 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 ADAMTS6Q9UKP5 1117 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 PDE10AQ9Y233 779 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 CA5BQ9Y2D0 317 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 DNAJC16Q9Y2G8 782 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms