RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 SUSD1Q6UWL2 747 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 PALM2Q8IXS6 379 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 GPR135Q8IZ08 494 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 DSELQ8IZU8 1212 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 MYO1HQ8N1T3 1032 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 MMGT1Q8N4V1 131 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 LSM14AQ8ND56 463 aaKnown RBP19.58■□□□□ 0.72
FOXA1-203ENST00000553751 SMPDL3AQ92484 453 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 TRIM44Q96DX7 344 aaPredicted RBP19.58■□□□□ 0.72
FOXA1-203ENST00000553751 CLIP3Q96DZ5 547 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 LINGO1Q96FE5 620 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 RUFY1Q96T51 708 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 SPRTNQ9H040 489 aaPredicted RBP19.58■□□□□ 0.72
FOXA1-203ENST00000553751 NSMCE4AQ9NXX6 385 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 PLCL2Q9UPR0 1127 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 VWA7Q9Y334 891 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 PIEZO2Q9H5I5 2752 aa19.58■□□□□ 0.72
FOXA1-203ENST00000553751 TCRBV9S1A1TA0A576 114 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 C21orf140B9A014 251 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 MEN1O00255 615 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 PIAS1O75925 651 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 SYF2O95926 243 aaKnown RBP19.57■□□□□ 0.72
FOXA1-203ENST00000553751 C1QAP02745 245 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 GPX6P59796 221 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 CDC20Q12834 499 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 SP140Q13342 867 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 LRRC56Q8IYG6 542 aaPredicted RBP19.57■□□□□ 0.72
FOXA1-203ENST00000553751 NOA1Q8NC60 698 aaKnown RBP19.57■□□□□ 0.72
FOXA1-203ENST00000553751 PPFIBP2Q8ND30 876 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 EXTL1Q92935 676 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 MR1Q95460 341 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 ZUFSPQ96AP4 578 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 WBP1Q96G27 269 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 ACAT2Q9BWD1 397 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 ZDHHC18Q9NUE0 388 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 EURLQ9NYK6 297 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 KCND3Q9UK17 655 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 KALRNO60229 2985 aa19.57■□□□□ 0.72
FOXA1-203ENST00000553751 FAM95CA0A1B0GW59 222 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 ZNF839A8K0R7 811 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 CXorf49A8MYA2 514 aaPredicted RBP19.56■□□□□ 0.72
FOXA1-203ENST00000553751 TARM1B6A8C7 271 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 E7ENX8 843 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 ZSCAN9O15535 394 aaPredicted RBP19.56■□□□□ 0.72
FOXA1-203ENST00000553751 NRP2O60462 931 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 CTSVO60911 334 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 C8GP07360 202 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 GSTA2P09210 222 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 IMPA1P29218 277 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 RPA3P35244 121 aaPredicted RBP19.56■□□□□ 0.72
FOXA1-203ENST00000553751 IL2P60568 153 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 TAP2Q03519 686 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 TBR1Q16650 682 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 LINC00303Q3SY05 128 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 CRTC2Q53ET0 693 aaPredicted RBP19.56■□□□□ 0.72
FOXA1-203ENST00000553751 TAF1BQ53T94 588 aaPredicted RBP19.56■□□□□ 0.72
FOXA1-203ENST00000553751 ATP1A1-AS1Q5TC04 95 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 ZNF385CQ66K41 422 aaPredicted RBP19.56■□□□□ 0.72
FOXA1-203ENST00000553751 LCN10Q6JVE6 187 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 CYS1Q717R9 158 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 CCDC25Q86WR0 208 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 MCATQ8IVS2 390 aaKnown RBP19.56■□□□□ 0.72
FOXA1-203ENST00000553751 SYTL1Q8IYJ3 562 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 CHST8Q9H2A9 424 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 RHOJQ9H4E5 214 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 SLC6A20Q9NP91 592 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 PDE10AQ9Y233 779 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 AP1M2Q9Y6Q5 423 aa19.56■□□□□ 0.72
FOXA1-203ENST00000553751 FAM159BA6NKW6 160 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 SLC16A5O15375 505 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 KATNA1O75449 491 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 KLK3P07288 261 aaPredicted RBP19.55■□□□□ 0.72
FOXA1-203ENST00000553751 HBQ1P09105 142 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 PRKAR1AP10644 381 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 CMPK1P30085 196 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 MAGEA4P43358 317 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 GCGRP47871 477 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 MC1RQ01726 317 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 GUCY2DQ02846 1103 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 TSTA3Q13630 321 aaPredicted RBP19.55■□□□□ 0.72
FOXA1-203ENST00000553751 PHKG1Q16816 387 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 ZC3H12BQ5HYM0 836 aaKnown RBP19.55■□□□□ 0.72
FOXA1-203ENST00000553751 TLDC1Q6P9B6 456 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 TMEM207Q6UWW9 146 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 ZNF655Q8N720 491 aaPredicted RBP19.55■□□□□ 0.72
FOXA1-203ENST00000553751 MNS1Q8NEH6 495 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 KIF18AQ8NI77 898 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 SLC39A7Q92504 469 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 VPS39Q96JC1 886 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 ZNF285Q96NJ3 590 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 SLC7A5P2Q9GIP4 190 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 ACTL8Q9H568 366 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 PARVBQ9HBI1 364 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 ENAMQ9NRM1 1142 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 STOX2Q9P2F5 926 aaPredicted RBP19.55■□□□□ 0.72
FOXA1-203ENST00000553751 TAC3Q9UHF0 121 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 CFAP46Q8IYW2 2715 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 FER1L5A0AVI2 2057 aa19.55■□□□□ 0.72
FOXA1-203ENST00000553751 IGKV1-8A0A0C4DH67 115 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 OR2A25A4D2G3 310 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms