RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 DAPK2Q9UIK4 370 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 ANGPTL3Q9Y5C1 460 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 MYH15Q9Y2K3 1946 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 IGHV3OR16-10A0A075B7F0 116 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 ANKUB1A6NFN9 424 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 SOCS3O14543 225 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 EPHB6O15197 1021 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 IDH3BO43837 385 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 OR10H2O60403 315 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 GLRA3O75311 464 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 PTP4A3O75365 173 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 AVILO75366 819 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 OR2T7P0C7T2 308 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 CYP2A7P20853 494 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 CDH3P22223 829 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 MNDAP41218 407 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 NFATC2Q13469 925 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 TNIP1Q15025 636 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 RAB41Q5JT25 222 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 PLEKHS1Q5SXH7 462 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 Q6ZRP5 223 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 GPRIN3Q6ZVF9 776 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 G2E3Q7L622 706 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 PCGF5Q86SE9 256 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 AACSQ86V21 672 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 CEP57Q86XR8 500 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 EID3Q8N140 333 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 FBXO39Q8N4B4 442 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 OR6S1Q8NH40 331 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 MAPK15Q8TD08 544 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 RASL10AQ92737 203 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 KIFC3Q9BVG8 833 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 RAB11FIP5Q9BXF6 653 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 OR2B2Q9GZK3 357 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 FAM49AQ9H0Q0 323 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-210ENST00000553693 MED20Q9H944 212 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 SERINC1Q9NRX5 453 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 SUCLA2Q9P2R7 463 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-210ENST00000553693 THEGQ9P2T0 379 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 SAMD9Q5K651 1589 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 DIP2CQ9Y2E4 1556 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 ALKQ9UM73 1620 aa3.32□□□□□ -1.88
SCFD1-210ENST00000553693 TCOF1Q13428 1488 aaKnown RBP3.31□□□□□ -1.88
SCFD1-210ENST00000553693 ZNF518AQ6AHZ1 1483 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 NPATQ14207 1427 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 CTDSP2O14595 271 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 CDK2AP2O75956 126 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 BAIAP3O94812 1187 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 ZWINTO95229 277 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 C22orf31O95567 290 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 VTNP04004 478 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 HSPA8P11142 646 aaKnown RBP3.31□□□□□ -1.88
SCFD1-210ENST00000553693 PRKACGP22612 351 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 PGFP49763 221 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 TMEM50BP56557 158 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 SQLEQ14534 574 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 SLC25A53Q5H9E4 307 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 LCN1P1Q5VSP4 162 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 SLC25A47Q6Q0C1 308 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 TMEM207Q6UWW9 146 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 BTN2A1Q7KYR7 527 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 RTN4RL2Q86UN3 420 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 TMEM173Q86WV6 379 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-210ENST00000553693 Q8N377 158 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 OR11H4Q8NGC9 324 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 DHX58Q96C10 678 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 C10orf90Q96M02 699 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 TIGD1Q96MW7 591 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 MS4A10Q96PG2 267 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 RAD9AQ99638 391 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 FAM207AQ9NSI2 230 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-210ENST00000553693 MAN2C1Q9NTJ4 1040 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 PRR34Q9NV39 138 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 PANK4Q9NVE7 773 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 DPP3Q9NY33 737 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 C19orf25Q9UFG5 118 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-210ENST00000553693 MUTYHQ9UIF7 546 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 MAN1B1Q9UKM7 699 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.31□□□□□ -1.88
SCFD1-210ENST00000553693 TRIM17Q9Y577 477 aa3.31□□□□□ -1.88
SCFD1-210ENST00000553693 ABCA6Q8N139 1617 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 KDM5CP41229 1560 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 AGLP35573 1532 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 CDK13Q14004 1512 aaKnown RBP3.3□□□□□ -1.88
SCFD1-210ENST00000553693 PLA2R1Q13018 1463 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 SHANK2Q9UPX8 1470 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 CNTLNQ9NXG0 1405 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 LOC100509620A0A075B734 347 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 OR2A25A4D2G3 310 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 C2orf81A6NN90 581 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 ENO4A6NNW6 628 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 MPTX1A8MV57 137 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 EPM2AB3EWF7 344 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 SEC24AO95486 1093 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 SLC2A2P11168 524 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-210ENST00000553693 LHCGRP22888 699 aa3.3□□□□□ -1.88
SCFD1-210ENST00000553693 RBMS1P29558 406 aaKnown RBP3.3□□□□□ -1.88
SCFD1-210ENST00000553693 TSFMP43897 325 aaKnown RBP3.3□□□□□ -1.88
SCFD1-210ENST00000553693 KRTAP10-8P60410 259 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms