RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PSIP1O75475 530 aaKnown RBP17.47■□□□□ 0.39
SHMT2-206ENST00000553529 WISP1O95388 367 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 UMODP07911 640 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 SFTPCP11686 197 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 PAMP19021 973 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 ALAS2P22557 587 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 OR1D4P47884 311 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 MLLT10P55197 1068 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 ADARP55265 1226 aaKnown RBP17.47■□□□□ 0.39
SHMT2-206ENST00000553529 VSX2P58304 361 aaPredicted RBP17.47■□□□□ 0.39
SHMT2-206ENST00000553529 BBS9Q3SYG4 887 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 NADK2Q4G0N4 442 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 TRMT10BQ6PF06 316 aaKnown RBP17.47■□□□□ 0.39
SHMT2-206ENST00000553529 CYHR1Q6ZMK1 362 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 ASB18Q6ZVZ8 466 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.47■□□□□ 0.39
SHMT2-206ENST00000553529 CFAP36Q96G28 342 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 TCF12Q99081 682 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 NAP1L3Q99457 506 aaPredicted RBP17.47■□□□□ 0.39
SHMT2-206ENST00000553529 NUDT9Q9BW91 350 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 TRIM31Q9BZY9 425 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 SYTL2Q9HCH5 934 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 CHMP2BQ9UQN3 213 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 SH2B3Q9UQQ2 575 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 PLAAQ9Y263 795 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 GOLGA6L10A0A0M3HER8 536 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 MAP3K7O43318 606 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 PIAS1O75925 651 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 SYF2O95926 243 aaKnown RBP17.46■□□□□ 0.39
SHMT2-206ENST00000553529 RPN2P04844 631 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 CDKN2DP55273 166 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 FASTKD3Q14CZ7 662 aaKnown RBP17.46■□□□□ 0.39
SHMT2-206ENST00000553529 CYP2A13Q16696 494 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 NKAIN1Q4KMZ8 207 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 PRR30Q53SZ7 412 aaPredicted RBP17.46■□□□□ 0.39
SHMT2-206ENST00000553529 PLD3Q8IV08 490 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 APLFQ8IW19 511 aaPredicted RBP17.46■□□□□ 0.39
SHMT2-206ENST00000553529 FDCSPQ8NFU4 85 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 OR9A1PQ8NGU1 263 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 GRK7Q8WTQ7 553 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 AARSD1Q9BTE6 412 aaKnown RBP17.46■□□□□ 0.39
SHMT2-206ENST00000553529 INTS10Q9NVR2 710 aaKnown RBP17.46■□□□□ 0.39
SHMT2-206ENST00000553529 CUEDC1Q9NWM3 386 aaPredicted RBP17.46■□□□□ 0.39
SHMT2-206ENST00000553529 IFT80Q9P2H3 777 aaPredicted RBP17.46■□□□□ 0.39
SHMT2-206ENST00000553529 CTSFQ9UBX1 484 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 TAC3Q9UHF0 121 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 IKZF3Q9UKT9 509 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 FAM169AQ9Y6X4 670 aa17.46■□□□□ 0.39
SHMT2-206ENST00000553529 MKRN2OSH3BPM6 223 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 MYO1CO00159 1063 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 CES2O00748 559 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 SLC16A8O95907 504 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 EIF2S1P05198 315 aaKnown RBP17.45■□□□□ 0.38
SHMT2-206ENST00000553529 ERGP11308 486 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 PGAM1P18669 254 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 CARSP49589 748 aaKnown RBP17.45■□□□□ 0.38
SHMT2-206ENST00000553529 DCDP81605 110 aaKnown RBP17.45■□□□□ 0.38
SHMT2-206ENST00000553529 PAPD7Q5XG87 772 aaKnown RBP17.45■□□□□ 0.38
SHMT2-206ENST00000553529 MRPL14Q6P1L8 145 aaKnown RBP17.45■□□□□ 0.38
SHMT2-206ENST00000553529 FBXO42Q6P3S6 717 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 PPP1R32Q7Z5V6 425 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 MRGPREQ86SM8 312 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 ANKMY2Q8IV38 441 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 ZNF480Q8WV37 535 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 SELENOSQ9BQE4 189 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 DPH7Q9BTV6 452 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 CHRNA10Q9GZZ6 450 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 ACSS2Q9NR19 701 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 CUTCQ9NTM9 273 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 TXLNGQ9NUQ3 528 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 PCYOX1Q9UHG3 505 aa17.45■□□□□ 0.38
SHMT2-206ENST00000553529 C9J4A7 227 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 KPNA5O15131 536 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 TCP1P17987 556 aaKnown RBP17.44■□□□□ 0.38
SHMT2-206ENST00000553529 AGXTP21549 392 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 ATP5DP30049 168 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 CASRP41180 1078 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 ELK3P41970 407 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 CD97P48960 835 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 WASHC2DQ5SRD0 308 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 TCTN3Q6NUS6 607 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 TTC23LQ6PF05 361 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 LRRC56Q8IYG6 542 aaPredicted RBP17.44■□□□□ 0.38
SHMT2-206ENST00000553529 PRSS58Q8IYP2 241 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 C2CD4AQ8NCU7 369 aaPredicted RBP17.44■□□□□ 0.38
SHMT2-206ENST00000553529 HMGCLL1Q8TB92 370 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 THAP4Q8WY91 577 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 C10orf90Q96M02 699 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 FOPNLQ96NB1 174 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 ZNF285Q96NJ3 590 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 EBNA1BP2Q99848 306 aaKnown RBP17.44■□□□□ 0.38
SHMT2-206ENST00000553529 NDC1Q9BTX1 674 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 SLC25A23Q9BV35 468 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 MFRPQ9BY79 579 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 SOX17Q9H6I2 414 aaPredicted RBP17.44■□□□□ 0.38
SHMT2-206ENST00000553529 SPATA7Q9P0W8 599 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 DHRS7Q9Y394 339 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 AP1M2Q9Y6Q5 423 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 RELNP78509 3460 aa17.44■□□□□ 0.38
SHMT2-206ENST00000553529 MAGEB16A2A368 324 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms