RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PKLRP30613 574 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 FOXL2P58012 376 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 OCA2Q04671 838 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 GRM7Q14831 915 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 HIF1AQ16665 826 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 TCTE1Q5JU00 501 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 PRAMEF13Q5VWM6 474 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 ZNF385CQ66K41 422 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-208ENST00000553370 PTRHD1Q6GMV3 140 aaKnown RBP9.52□□□□□ -0.89
ACTN1-208ENST00000553370 FAM180AQ6UWF9 173 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 SHISA6Q6ZSJ9 500 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 MICALCLQ6ZW33 695 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 MCATQ8IVS2 390 aaKnown RBP9.52□□□□□ -0.89
ACTN1-208ENST00000553370 FAM20CQ8IXL6 584 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 OR52K1Q8NGK4 314 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 DNAJB14Q8TBM8 379 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 COG1Q8WTW3 980 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 UBE2Q2Q8WVN8 375 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 ASZ1Q8WWH4 475 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 MRFAP1L1Q96HT8 127 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 FOPNLQ96NB1 174 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 TMEM121Q9BTD3 319 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 YIPF2Q9BWQ6 316 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 CHRNA10Q9GZZ6 450 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 SOX17Q9H6I2 414 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-208ENST00000553370 SLC6A20Q9NP91 592 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 CUTCQ9NTM9 273 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 NXT1Q9UKK6 140 aaKnown RBP9.52□□□□□ -0.89
ACTN1-208ENST00000553370 EPN1Q9Y6I3 576 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-208ENST00000553370 GTF3C1Q12789 2109 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 ERI2A8K979 691 aaKnown RBP9.51□□□□□ -0.89
ACTN1-208ENST00000553370 MIF4GDA9UHW6 222 aaKnown RBP9.51□□□□□ -0.89
ACTN1-208ENST00000553370 MASP2O00187 686 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 MAP2K7O14733 419 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 DSCR3O14972 297 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 HCRTR1O43613 425 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 OR1I1O60431 355 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 METTL18O95568 372 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 GOT2P00505 430 aaKnown RBP9.51□□□□□ -0.89
ACTN1-208ENST00000553370 EIF2S1P05198 315 aaKnown RBP9.51□□□□□ -0.89
ACTN1-208ENST00000553370 CTSBP07858 339 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 UMODP07911 640 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 MMP11P24347 488 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 ACADLP28330 430 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 FOXN2P32314 431 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 DCTP40126 519 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 VSX2P58304 361 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-208ENST00000553370 TSTA3Q13630 321 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-208ENST00000553370 ZNF658BQ4V348 819 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-208ENST00000553370 IGFL3Q6UXB1 125 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 UNC5DQ6UXZ4 953 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 NLRP9Q7RTR0 991 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 PRSS58Q8IYP2 241 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 SLC22A15Q8IZD6 547 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 DNAJC22Q8N4W6 341 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 CCDC89Q8N998 374 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 OR4L1Q8NH43 312 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 PPP4R1Q8TF05 950 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 ALG3Q92685 438 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 HDAC10Q969S8 669 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 THOC3Q96J01 351 aaKnown RBP9.51□□□□□ -0.89
ACTN1-208ENST00000553370 IL17FQ96PD4 163 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 PANX2Q96RD6 677 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 CRB3Q9BUF7 120 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 LHPPQ9H008 270 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 ZNF552Q9H707 407 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-208ENST00000553370 WDR54Q9H977 334 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 CATSPERZQ9NTU4 200 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 GNPTGQ9UJJ9 305 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 PACSIN2Q9UNF0 486 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-208ENST00000553370 ZNF232Q9UNY5 417 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 OSGIN2Q9Y236 505 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 HRH3Q9Y5N1 445 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 MRFAP1Q9Y605 127 aa9.51□□□□□ -0.89
ACTN1-208ENST00000553370 SLC5A10A0PJK1 596 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 GRID2IPA4D2P6 1211 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 MROH6A6NGR9 719 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 CBX6O95503 412 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 CLDN1O95832 211 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 FTCDO95954 541 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 ACPPP15309 386 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 CD9P21926 228 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 FBLP22087 321 aaKnown RBP9.5□□□□□ -0.89
ACTN1-208ENST00000553370 PEBP1P30086 187 aaKnown RBP9.5□□□□□ -0.89
ACTN1-208ENST00000553370 FDFT1P37268 417 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 GRIA3P42263 894 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 TTPAP49638 278 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 ARG2P78540 354 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 KIF5AQ12840 1032 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 MSLNQ13421 630 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-208ENST00000553370 ZNF169Q14929 603 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-208ENST00000553370 FAM214AQ32MH5 1076 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 C11orf91Q3C1V1 193 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 TSTD2Q5T7W7 516 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 YOD1Q5VVQ6 348 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-208ENST00000553370 KCTD11Q693B1 232 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 MRPL14Q6P1L8 145 aaKnown RBP9.5□□□□□ -0.89
ACTN1-208ENST00000553370 FIGLAQ6QHK4 219 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 LINC00696Q6ZRV3 163 aa9.5□□□□□ -0.89
ACTN1-208ENST00000553370 OVCH1Q7RTY7 1134 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms