RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 CCDC83Q8IWF9 413 aa4.71□□□□□ -1.66
SCFD1-209ENST00000553280 PEX5LQ8IYB4 626 aa4.71□□□□□ -1.66
SCFD1-209ENST00000553280 OR4K1Q8NGD4 311 aa4.71□□□□□ -1.66
SCFD1-209ENST00000553280 BICD1Q96G01 975 aa4.71□□□□□ -1.66
SCFD1-209ENST00000553280 FAM71F1Q96KD3 344 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-209ENST00000553280 SEZ6LQ9BYH1 1024 aa4.71□□□□□ -1.66
SCFD1-209ENST00000553280 TNMDQ9H2S6 317 aa4.71□□□□□ -1.66
SCFD1-209ENST00000553280 OLFML3Q9NRN5 406 aa4.71□□□□□ -1.66
SCFD1-209ENST00000553280 SPHK1Q9NYA1 384 aa4.71□□□□□ -1.66
SCFD1-209ENST00000553280 ODF2LQ9ULJ1 636 aa4.71□□□□□ -1.66
SCFD1-209ENST00000553280 GPR132Q9UNW8 380 aa4.71□□□□□ -1.66
SCFD1-209ENST00000553280 ILVBLA1L0T0 632 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 TTI1O43156 1089 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 VEGFDO43915 354 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 SNX3O60493 162 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 CDH1P12830 882 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 DAOP14920 347 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 SERPINB6P35237 376 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 NPBWR1P48145 328 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 NT5C2P49902 561 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 PDX1P52945 283 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 STARD6P59095 220 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 ZBTB17Q13105 803 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 ZNF260Q3ZCT1 412 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 PHLDA2Q53GA4 152 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 SPDYCQ5MJ68 293 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 ZNF549Q6P9A3 640 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 ANKRD33Q7Z3H0 272 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 ZNF441Q8N8Z8 693 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 LNX1Q8TBB1 728 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-209ENST00000553280 ST7LQ8TDW4 575 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 ELP5Q8TE02 316 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 C5orf30Q96GV9 206 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 C17orf77Q96MU5 243 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 TMEM237Q96Q45 408 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 GAL3ST4Q96RP7 486 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 ATG101Q9BSB4 218 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 SPXQ9BT56 116 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 TRAF4Q9BUZ4 470 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-209ENST00000553280 OSBPL8Q9BZF1 889 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 MIS12Q9H081 205 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 AKIRIN1Q9H9L7 192 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-209ENST00000553280 RNPEPL1Q9HAU8 725 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 APOBEC3GQ9HC16 384 aaKnown RBP4.7□□□□□ -1.66
SCFD1-209ENST00000553280 TCF7L2Q9NQB0 619 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 PNPLA3Q9NST1 481 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 IL19Q9UHD0 177 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 DAPK2Q9UIK4 370 aa4.7□□□□□ -1.66
SCFD1-209ENST00000553280 A0A0A6YYC8 382 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-209ENST00000553280 A0A1W2PPI3 338 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 I3L1I5 382 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-209ENST00000553280 SYNGR3O43761 229 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 SEC22BO75396 215 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 DDHD2O94830 711 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 BAG4O95429 457 aaKnown RBP4.69□□□□□ -1.66
SCFD1-209ENST00000553280 MOCS2O96007 188 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-209ENST00000553280 IL15P40933 162 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-209ENST00000553280 HTR6P50406 440 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 SLC12A3P55017 1021 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 IL1RL1Q01638 556 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 SULT2A1Q06520 285 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 ARHGAP1Q07960 439 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 RASGEF1BQ0VAM2 473 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 KIR2DS3Q14952 304 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 PPA1Q15181 289 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 ITPRIPL2Q3MIP1 535 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 IRAK1BP1Q5VVH5 260 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 PRSS55Q6UWB4 352 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-209ENST00000553280 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-209ENST00000553280 EXOC3L1Q86VI1 746 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 ANKRD46Q86W74 232 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 MEX3DQ86XN8 651 aaKnown RBP4.69□□□□□ -1.66
SCFD1-209ENST00000553280 LGI2Q8N0V4 545 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 FBXL14Q8N1E6 418 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 IQCF1Q8N6M8 205 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 OR11H4Q8NGC9 324 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 LILRB1Q8NHL6 650 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-209ENST00000553280 SLC26A7Q8TE54 656 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 CKAP2Q8WWK9 683 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 PGM2Q96G03 612 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 ADGRG7Q96K78 797 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 FAM20AQ96MK3 541 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 GDAP1L1Q96MZ0 367 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 RTP3Q9BQQ7 232 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 POLR3CQ9BUI4 534 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-209ENST00000553280 S1PR5Q9H228 398 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 ACTL8Q9H568 366 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 EBF2Q9HAK2 575 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 PELI2Q9HAT8 420 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 SLC38A7Q9NVC3 462 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 DNAJC11Q9NVH1 559 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 ANO10Q9NW15 660 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 PKD2L2Q9NZM6 624 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 ISY1Q9ULR0 285 aaKnown RBP4.69□□□□□ -1.66
SCFD1-209ENST00000553280 ITM2BQ9Y287 266 aa4.69□□□□□ -1.66
SCFD1-209ENST00000553280 A0A0B4J203 849 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 ASPDHA6ND91 283 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 TMEM150CB9EJG8 249 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 ATP9AO75110 1047 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 BCAS2O75934 225 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms