RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ARHGAP12Q8IWW6 846 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 VWA5B2Q8N398 1253 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 DTWD1Q8N5C7 304 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 GOLGA6L1Q8N7Z2 621 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 TMEM178AQ8NBL3 297 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 OR4E2Q8NGC2 313 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 OR10Q1Q8NGQ4 319 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 SLC35G2Q8TBE7 412 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 FAM57AQ8TBR7 257 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 BRIX1Q8TDN6 353 aaKnown RBP4.94□□□□□ -1.62
CKAP4-203ENST00000553039 PIH1D2Q8WWB5 315 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 PSMF1Q92530 271 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 PWWP2AQ96N64 755 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 ZSCAN5AQ9BUG6 496 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 SPATA16Q9BXB7 569 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 AMBRA1Q9C0C7 1298 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 SLC39A8Q9C0K1 460 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 PRDM14Q9GZV8 571 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 SLC26A1Q9H2B4 701 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 TP63Q9H3D4 680 aaPredicted RBP4.94□□□□□ -1.62
CKAP4-203ENST00000553039 SRMSQ9H3Y6 488 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 LRRC19Q9H756 370 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 NOD2Q9HC29 1040 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF160Q9HCG1 818 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 HAUS2Q9NVX0 235 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 ACSL5Q9ULC5 683 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 CDYLQ9Y232 598 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 GPR55Q9Y2T6 319 aaPredicted RBP4.94□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF281Q9Y2X9 895 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 L3MBTL1Q9Y468 752 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 PCYT1BQ9Y5K3 369 aaPredicted RBP4.94□□□□□ -1.62
CKAP4-203ENST00000553039 HS3ST3B1Q9Y662 390 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 ALG6Q9Y672 507 aa4.94□□□□□ -1.62
CKAP4-203ENST00000553039 SONP18583 2426 aaKnown RBP4.94□□□□□ -1.62
CKAP4-203ENST00000553039 A0A0J9YYE9 177 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 KLHL33A6NCF5 533 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 EIF3CLB5ME19 914 aaKnown RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 FAM47E-STBD1D6RA91 191 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 DFFAO00273 331 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 SYT5O00445 386 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 DDX3XO00571 662 aaKnown RBP eCLIP4.93□□□□□ -1.623e-12■■■□□ 18.9
CKAP4-203ENST00000553039 ZSCAN9O15535 394 aaPredicted RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 PHF1O43189 567 aaPredicted RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 DNAJB6O75190 326 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 ALOX12BO75342 701 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 POP7O75817 140 aaKnown RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 WISP2O76076 250 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 CLDN7O95471 211 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 F10P00742 488 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 TRBC1P01850 177 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 TPOP07202 933 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 EPXP11678 715 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 PVRP15151 417 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 HLA-DPA1P20036 260 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 CA4P22748 312 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 IL4RP24394 825 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 PTPN9P43378 593 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 CHRNA4P43681 627 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 ZFP36L2P47974 494 aaKnown RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 CTSCP53634 463 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 RPL26P61254 145 aaKnown RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 PHC1P78364 1004 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 OCA2Q04671 838 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 LRRC63Q05C16 580 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 CUL4AQ13619 759 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 GALNT3Q14435 633 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 CDO1Q16878 200 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 FAM214AQ32MH5 1076 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 CCDC14Q49A88 953 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 CCDC40Q4G0X9 1142 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 PTPN20Q4JDL3 420 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 VWA3BQ502W6 1294 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 Q5PR19 223 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 FKBP15Q5T1M5 1219 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 RESP18Q5W5W9 173 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 KIAA0930Q6ICG6 404 aaPredicted RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 HEPHL1Q6MZM0 1159 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 SCYL2Q6P3W7 929 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 FBXO38Q6PIJ6 1188 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 PAOXQ6QHF9 649 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 ADGRG6Q86SQ4 1221 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 HIPK1Q86Z02 1210 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 ARHGEF19Q8IW93 802 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 SIRT6Q8N6T7 355 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF655Q8N720 491 aaPredicted RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 LCN9Q8WX39 176 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 RXFP2Q8WXD0 754 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 CENPIQ92674 756 aaPredicted RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 GLYATL1Q969I3 302 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 CELF6Q96J87 481 aaKnown RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF354BQ96LW1 612 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 Q96MF0 132 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 EIF3CQ99613 913 aaKnown RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 PIP5K1AQ99755 562 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 SGPP1Q9BX95 441 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 MAGEB5Q9BZ81 275 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 CHRNA10Q9GZZ6 450 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 ACP6Q9NPH0 428 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 NLRC4Q9NPP4 1024 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 C14orf119Q9NWQ9 140 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms