RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 PCMTD2Q9NV79 361 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 ACOT9Q9Y305 439 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 TNRC6AQ8NDV7 1962 aaKnown RBP11.03□□□□□ -0.64
TMEM116-218ENST00000552839 SPTBN1Q01082 2364 aaKnown RBP11.03□□□□□ -0.64
TMEM116-218ENST00000552839 A0A096LPK6 155 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 BTN3A1O00481 513 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 HIST1H2AGP0C0S8 130 aaPredicted RBP11.03□□□□□ -0.64
TMEM116-218ENST00000552839 MPC1LP0DKB6 136 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 ZNF37AP17032 561 aaPredicted RBP11.03□□□□□ -0.64
TMEM116-218ENST00000552839 HIST1H2ADP20671 130 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 CD9P21926 228 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 PDHA2P29803 388 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 CCNFP41002 786 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 BDKRB1P46663 353 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 UQCRFS1P47985 274 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 ABHD18Q0P651 414 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 CSHL1Q14406 222 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 CASP8Q14790 479 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 RPE65Q16518 533 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 FAM83EQ2M2I3 478 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 ACSBG2Q5FVE4 666 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 ARMC6Q6NXE6 501 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 DUS1LQ6P1R4 473 aaKnown RBP11.03□□□□□ -0.64
TMEM116-218ENST00000552839 ADGRD1Q6QNK2 874 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 LRIG3Q6UXM1 1119 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 UNC5DQ6UXZ4 953 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 WASH2PQ6VEQ5 465 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 NEK10Q6ZWH5 1172 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 UBE2R2Q712K3 238 aaPredicted RBP11.03□□□□□ -0.64
TMEM116-218ENST00000552839 ATCAYQ86WG3 371 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 DCUN1D3Q8IWE4 304 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 RBM12BQ8IXT5 1001 aaKnown RBP11.03□□□□□ -0.64
TMEM116-218ENST00000552839 GIMAP7Q8NHV1 300 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 STARD8Q92502 1023 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 EXT2Q93063 718 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 HIST1H2AHQ96KK5 128 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 ZIM3Q96PE6 472 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 TEFMQ96QE5 360 aaKnown RBP11.03□□□□□ -0.64
TMEM116-218ENST00000552839 HIST1H2AJQ99878 128 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 CTRCQ99895 268 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 H2AFJQ9BTM1 129 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 EFHD1Q9BUP0 239 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 OR52A5Q9H2C5 316 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 MVB12BQ9H7P6 319 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 APMAPQ9HDC9 416 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 WASH6PQ9NQA3 447 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 KCNK4Q9NYG8 393 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 PDP2Q9P2J9 529 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 CPNE7Q9UBL6 633 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 CTNNAL1Q9UBT7 734 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 POLG2Q9UHN1 485 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 SPTAN1Q13813 2472 aaKnown RBP11.03□□□□□ -0.64
TMEM116-218ENST00000552839 SPENQ96T58 3664 aaKnown RBP11.03□□□□□ -0.64
TMEM116-218ENST00000552839 TEX15Q9BXT5 2789 aa11.03□□□□□ -0.64
TMEM116-218ENST00000552839 NPEPPSL1A6NEC2 478 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 A8MU76 341 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 ZBTB14O43829 449 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 GPC4O75487 556 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 SLCO2B1O94956 709 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 C1QAP02745 245 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 C8GP07360 202 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 CCDC166P0CW27 439 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 TCN2P20062 427 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 ATP6V0D1P61421 351 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 GPLD1P80108 840 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 MC2RQ01718 297 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 PRKAA1Q13131 559 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 SP140Q13342 867 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 TSTA3Q13630 321 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-218ENST00000552839 TSNAXIP1Q2TAA8 658 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 SNAP47Q5SQN1 464 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 KLHL35Q6PF15 583 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 IYDQ6PHW0 289 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 ABRAXAS1Q6UWZ7 409 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 ARHGAP22Q7Z5H3 698 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 ADAMTSL2Q86TH1 951 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 ZNF761Q86XN6 746 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-218ENST00000552839 TDRPQ86YL5 185 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 CEP97Q8IW35 865 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 TBC1D21Q8IYX1 336 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 SFRP1Q8N474 314 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 TEX19Q8NA77 164 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 SPDYE1Q8NFV5 336 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-218ENST00000552839 EEF1AKMT1Q8WVE0 214 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 INSM2Q96T92 566 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-218ENST00000552839 SLC30A3Q99726 388 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 EGFL8Q99944 293 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 RAB11FIP5Q9BXF6 653 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 UNKQ9C0B0 810 aaKnown RBP11.02□□□□□ -0.65
TMEM116-218ENST00000552839 NMRAL1Q9HBL8 299 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 PRM3Q9NNZ6 103 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 GALPQ9UBC7 116 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 RUVBL2Q9Y230 463 aaKnown RBP11.02□□□□□ -0.65
TMEM116-218ENST00000552839 WDR37Q9Y2I8 494 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 TMEM184BQ9Y519 407 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-218ENST00000552839 MRPS18BQ9Y676 258 aaKnown RBP11.02□□□□□ -0.65
TMEM116-218ENST00000552839 KCNMB2Q9Y691 235 aa11.02□□□□□ -0.65
TMEM116-218ENST00000552839 ZNF839A8K0R7 811 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 STK17BO94768 372 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 AGFG2O95081 481 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms