RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 SIRPB2Q5JXA9 342 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 YOD1Q5VVQ6 348 aaPredicted RBP10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 C11orf63Q6NUN7 778 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 HOOK3Q86VS8 718 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 CHERPQ8IWX8 916 aaKnown RBP10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 SYCE1Q8N0S2 351 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 PLD5Q8N7P1 536 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 MNS1Q8NEH6 495 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 MYRIPQ8NFW9 859 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 CCDC110Q8TBZ0 833 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 ZNF285Q96NJ3 590 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 DMRTA2Q96SC8 542 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 OSBPL9Q96SU4 736 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 HGH1Q9BTY7 390 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 ALG2Q9H553 416 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 COG4Q9H9E3 785 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 SNX12Q9UMY4 172 aa10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 MRPS2Q9Y399 296 aaKnown RBP10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 V9GYY5 206 aaPredicted RBP10.86□□□□□ -0.67
SUPT16H-202ENST00000552829 SPOPO43791 374 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 COX6A1P12074 109 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 COMTP21964 271 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 PEBP1P30086 187 aaKnown RBP10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 CD68P34810 354 aaPredicted RBP10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 SHMT2P34897 504 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 CHRNA4P43681 627 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 MARCKSL1P49006 195 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 WNT3AP56704 352 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 KLC1Q07866 573 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 FOXD4Q12950 439 aaPredicted RBP10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 RPA4Q13156 261 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 PTPRCAPQ14761 206 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 TCEAL1Q15170 157 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 HADHQ16836 314 aaKnown RBP10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 TEX44Q53QW1 395 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 KRTCAP3Q53RY4 240 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 NDUFAF7Q7L592 441 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 MCATQ8IVS2 390 aaKnown RBP10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 SIRT6Q8N6T7 355 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 KCTD6Q8NC69 237 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 CHDHQ8NE62 594 aaPredicted RBP10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 DENND1AQ8TEH3 1009 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 NANOS1Q8WY41 292 aaKnown RBP10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 NRGNQ92686 78 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 TFGQ92734 400 aaPredicted RBP10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 C8orf44Q96CB5 159 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 GPR137Q96N19 417 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 OLFM3Q96PB7 478 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 RNF157Q96PX1 679 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 CRB3Q9BUF7 120 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 CUTCQ9NTM9 273 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 UBP1Q9NZI7 540 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 IL1RAPL1Q9NZN1 696 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 OR6C2Q9NZP2 312 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 PKP3Q9Y446 797 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 ALG6Q9Y672 507 aa10.85□□□□□ -0.67
SUPT16H-202ENST00000552829 STAB1Q9NY15 2570 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 HRNRQ86YZ3 2850 aaPredicted RBP10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 DNAJC13O75165 2243 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 FITM1A5D6W6 292 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 OR5H15A6NDH6 313 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 CFAP99D6REC4 459 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 E9PLN8 166 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 IFRD1O00458 451 aaPredicted RBP10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 MAP2K7O14733 419 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 F10P00742 488 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 TCP1P17987 556 aaKnown RBP10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 SSR1P43307 286 aaKnown RBP10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 OR1D4P47884 311 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 CARSP49589 748 aaKnown RBP10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 XIAPP98170 497 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 TFF3Q07654 80 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 AP1B1Q10567 949 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 WHAMMP3Q1A5X7 153 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 RIPOR1Q6ZS17 1223 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 GLT6D1Q7Z4J2 308 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 MAP7D3Q8IWC1 876 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 DTWD1Q8N5C7 304 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 STT3BQ8TCJ2 826 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 MS4A14Q96JA4 679 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 MAGED4Q96JG8 741 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 MRGPRX2Q96LB1 330 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 TEKT5Q96M29 485 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 MDFIQ99750 246 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 VKORC1Q9BQB6 163 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 FAM153AQ9UHL3 310 aa10.84□□□□□ -0.67
SUPT16H-202ENST00000552829 IGLV3-16A0A075B6K0 115 aa10.83□□□□□ -0.68
SUPT16H-202ENST00000552829 IGLV3-12A0A075B6K2 115 aa10.83□□□□□ -0.68
SUPT16H-202ENST00000552829 NSG1A0A0A6YYJ2 146 aa10.83□□□□□ -0.68
SUPT16H-202ENST00000552829 FOXO6A8MYZ6 492 aa10.83□□□□□ -0.68
SUPT16H-202ENST00000552829 STX7O15400 261 aaKnown RBP10.83□□□□□ -0.68
SUPT16H-202ENST00000552829 SRP72O76094 671 aaKnown RBP10.83□□□□□ -0.68
SUPT16H-202ENST00000552829 MED26O95402 600 aa10.83□□□□□ -0.68
SUPT16H-202ENST00000552829 CELA2AP08217 269 aa10.83□□□□□ -0.68
SUPT16H-202ENST00000552829 ZGLP1P0C6A0 271 aa10.83□□□□□ -0.68
SUPT16H-202ENST00000552829 ATP1B2P14415 290 aaPredicted RBP10.83□□□□□ -0.68
SUPT16H-202ENST00000552829 KDELR1P24390 212 aa10.83□□□□□ -0.68
SUPT16H-202ENST00000552829 MCM3P25205 808 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms